Job Description P0AAS5 Confidence 19.02% Date Thu Jan 5 11:13:41 GMT 2012 Rank 8 Aligned Residues 71 % Identity 17% Template c2xgyA_ PDB info PDB header:viral protein/isomerase Chain: A: PDB Molecule:relik capsid n-terminal domain; PDBTitle: complex of rabbit endogenous lentivirus (relik)capsid with2 cyclophilin a Resolution 1.80 Å

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		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.						.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.									.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160					.	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.																				.	.	.	.	.	.	.	.																				.	.	.	.
Query SS confidence																			.	.	.	.	.																				.	.	.	.	.	.	.	.																				.	.	.	.
Query Sequence		Q	P	L	A	A	A	W	M	Q	R	A	E	E	T	G	L	F	.	.	.	.	.	G	P	L	A	L	A	A	S	D	P	L	P	A	E	L	R	Q	F	R	.	.	.	.	.	.	.	.	H	C	F	Q	A	A	L	N	G	V	K	T	D	W	R	H	W	L	G	.	.	.	.	K	G	P	G	L	T	P	S
Query Conservation																			.	.	.	.	.																				.	.	.	.	.	.	.	.																				.	.	.	.
Alig confidence																			.	.	.	.	.																				.	.	.	.	.	.	.	.																				.	.	.	.
Template Conservation
Template Sequence		P	G	L	I	A	A	W	L	K	Q	V	Q	E	H	G	L	T	H	P	A	T	I	T	Y	F	G	V	I	S	I	N	F	T	S	V	D	I	N	M	L	L	N	V	T	P	G	A	E	K	Q	L	V	I	D	K	I	K	E	K	A	I	A	W	D	E	M	H	P	P	P	P	A	D	A	A	G	P	V	P	L
Template Known Secondary structure																	T	T	S											T	T	T													S																							S					T	T
Template Predicted Secondary structure
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		169	170	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	D	D	T	L	S	G	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	S	D	Q	I	R	G	I
Template Known Secondary structure							T	T	T
Template Predicted Secondary structure
Template SS confidence
		98	.	100	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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