Job Description P37630 Confidence 2.80% Date Thu Jan 5 11:56:03 GMT 2012 Rank 61 Aligned Residues 64 % Identity 17% Template c2k27A_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:paired box protein pax-8; PDBTitle: solution structure of human pax8 paired box domain Resolution UNK

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		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.					.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure																																												.	.	.	.
Query SS confidence																																												.	.	.	.
Query Sequence		G	S	K	S	D	G	T	P	V	Q	A	Y	S	S	L	I	G	N	C	L	I	A	V	P	V	L	L	T	L	L	G	F	I	W	S	I	T	L	L	R	S	A	.	.	.	.	D	I	T	P	H	Y	V	A	G	H	V	L	L	G	L	T	A	I	C	A	C	L	I	G	L	V	A	T	I	V	H	Q	T	R
Query Conservation																																												.	.	.	.
Alig confidence																																												.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	V	I	G	G	S	K	P	K	V	A	T	P	K	V	V	E	K	I	G	D	Y	K	R	Q	N	P	T	M	F	A	W	E	I	R	D	R	L	L	A	E	G	V	C	D	N	D	T	V	P	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	S	S	I	N	R	I	I	R
Template Known Secondary structure														T	T													S	S	S													T		S		T	T	T	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.																					.	.	.	.	.	130	.	.	.
		216	.	.	.	220	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	T	F	S	T	K	E	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	K	V	Q	Q	P	F	N
Template Known Secondary structure				S				S
Template Predicted Secondary structure
Template SS confidence
		134	.	.	.	.	.	140	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions