Job Description P16869 Confidence 33.85% Date Thu Jan 5 11:35:50 GMT 2012 Rank 40 Aligned Residues 156 % Identity 12% Template d2zfga1 SCOP info Transmembrane beta-barrels Porins Porin Resolution 1.59

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		508	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	Y	A	S	Y	T	S	I	F	Q	P	Q	N	D	R	D	S	S	G	K	Y	L	A	P	I	T	G	N	N	Y	E	L	G	L	K	S	D	W	M	N	S	R	L	T	T	T	L	A	I	F	R	I	E	Q	D	N	V	A	Q	S	T	G	T	P	I	P	G	S	N	G	E	T	A	Y	K	A	V	D	G	T
Query Conservation
Alig confidence																																								.	.																									.	.	.	.	.	.	.	.	.	.
Template Conservation																																								.	.																									.	.	.	.	.	.	.	.	.	.
Template Sequence		F	G	I	V	G	A	Y	G	A	A	D	R	T	N	L	Q	E	A	Q	P	L	G	N	G	K	K	A	E	Q	W	A	T	G	L	K	Y	D	A	.	.	N	N	I	Y	L	A	A	N	Y	G	E	T	R	N	A	T	P	I	T	N	K	F	T	N	.	.	.	.	.	.	.	.	.	.	T	S	G	F	A	N
Template Known Secondary structure																			T	S	S	B				S														.	.	T	T												S		S					T	T	T	T	.	.	.	.	.	.	.	.	.	.						S
Template Predicted Secondary structure																																								.	.																									.	.	.	.	.	.	.	.	.	.
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.			.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.											.	.	.	250	.	.
		588	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	S	K	G	V	E	F	E	L	N	G	A	I	T	D	N	W	Q	L	T	F	G	A	T	R	Y	I	A	E	D	N	E	G	N	A	V	N	P	N	L	P	R	T	T	V	K	M	F	T	S	Y	R	L	P	V	M	P	E	L	T	V	G	G	G	V	N	W	Q	N	R	V	Y	T	D	T	V	T	P	Y	G
Query Conservation
Alig confidence																																										.	.												.	.															.	.	.	.	.	.	.	.
Template Conservation																																										.	.												.	.															.	.	.	.	.	.	.	.
Template Sequence		K	T	Q	D	V	L	L	V	A	Q	Y	Q	F	D	F	G	L	R	P	S	I	A	Y	T	K	S	K	A	K	D	V	E	G	I	G	D	V	D	L	V	.	.	N	Y	F	E	V	G	A	T	Y	Y	F	.	.	N	K	N	M	S	T	Y	V	D	Y	I	I	N	Q	.	.	.	.	.	.	.	.	I	D	S
Template Known Secondary structure															T	T	S																T	T	T							.	.												.	.		T	T												.	.	.	.	.	.	.	.			T
Template Predicted Secondary structure																																										.	.												.	.															.	.	.	.	.	.	.	.
Template SS confidence
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.			.	.	.	.	.	.	.	300	.	.	.			.	.	.	.	.	.	310	.	.	.	.	.	.	.									.	.	320
		668	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	F	R	A	E	Q	G	S	Y	A	L	V	D	L	F	T	R	Y	Q	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	N	K	L	G	V	G	S	D	D	T	V	A	V	G	I	V	Y	Q	F
Template Known Secondary structure		T		T	T					B
Template Predicted Secondary structure
Template SS confidence
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions