Job Description P16869 Confidence 82.09% Date Thu Jan 5 11:35:50 GMT 2012 Rank 31 Aligned Residues 155 % Identity 13% Template d2fgqx1 SCOP info Transmembrane beta-barrels Porins Porin Resolution 1.45

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		535	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	N	Y	E	L	G	L	K	S	D	W	M	N	S	R	L	T	T	T	L	A	I	F	R	I	E	Q	D	N	V	A	Q	S	T	G	T	P	I	P	G	S	N	G	E	T	A	Y	K	A	V	D	G	T	V	S	K	G	V	E	F	E	L	N	G	A	I	T	D	N	W	Q	L	T	F	G	A	T	R	Y	I
Query Conservation
Alig confidence													.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Template Conservation													.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Template Sequence		R	Y	I	G	G	Y	V	A	Y	D	N	.	.	G	P	L	S	A	S	L	G	L	A	Q	Q	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	A	V	G	G	L	A	T	D	R	D	E	I	T	L	G	A	S	Y	N	F	G	V	.	A	K	L	S	G	L	L	Q	Q	T	K
Template Known Secondary structure													.	.	S	S												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	T																	S	S	.
Template Predicted Secondary structure													.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180			.	.	.	.	.	.	.	.	.	190	.	.	.																				.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.		.	.	.	220	.	.	.	.	.	.	.
		615	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	D	N	E	G	N	A	V	N	P	N	L	P	R	T	T	V	K	M	F	T	S	Y	R	L	P	V	M	P	E	L	T	V	G	G	G	V	N	W	Q	N	R	V	Y	T	D	T	V	T	P	Y	G	T	F	R	A	E	Q	G	S	Y	A	L	V	D	L	F	T	R	Y	Q	V	T	K	N	F	S	L	Q
Query Conservation
Alig confidence													.	.	.	.												.	.																.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.												.	.																.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	K	R	D	I	G	G	D	I	K	T	.	.	.	.	N	S	Y	M	L	G	A	S	A	P	V	.	.	G	G	V	G	E	V	K	L	Q	Y	A	L	Y	D	Q	.	.	.	.	.	.	.	.	.	.	.	.	K	A	I	D	S	K	A	H	Q	I	T	L	G	Y	V	H	N	L	S	K	R	T	A	L	Y
Template Known Secondary structure					T	T	S						.	.	.	.												.	.	T	T	T													.	.	.	.	.	.	.	.	.	.	.	.	G	G	G	T														S	S	S	S
Template Predicted Secondary structure													.	.	.	.												.	.																.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.					.	240	.	.	.	.	.	.	.	.	.			250	.	.	.	.	.	.	.	.	.	260	.	.	.	.													.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
		695	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.									.	720	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.
Query Sequence		G	N	V	N	N	L	F	D	K	T	Y	D	T	N	V	E	G	S	I	V	Y	G	T	P	.	.	.	.	.	.	.	.	R	N	F	S	I	T	G	T	Y	Q	F
Query Conservation																										.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	N	L	A	F	L	K	N	K	D	A	S	T	L	G	L	Q	A	K	G	V	Y	A	G	G	V	Q	A	G	E	S	Q	T	G	V	Q	V	G	I	R	H	A	F
Template Known Secondary structure											T	T							B	T	T	T	B		S				T	T
Template Predicted Secondary structure
Template SS confidence
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions