Job Description P16869 Confidence 50.52% Date Thu Jan 5 11:35:50 GMT 2012 Rank 37 Aligned Residues 175 % Identity 8% Template d1uynx_ SCOP info Transmembrane beta-barrels Autotransporter Autotransporter Resolution 2.60

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		533	.	.	.	.	.	.	540	.	.	.	.	.		.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.		.	.	.	.	.	.	610
Predicted Secondary structure															.																																																											.
Query SS confidence															.																																																											.
Query Sequence		T	G	N	N	Y	E	L	G	L	K	S	D	W	.	M	N	S	R	L	T	T	T	L	A	I	F	R	I	E	Q	D	N	V	A	Q	S	T	G	T	P	I	P	G	S	N	G	E	T	A	Y	K	A	V	D	G	T	V	S	K	G	V	E	F	E	L	N	G	A	I	T	D	N	.	W	Q	L	T	F	G	A
Query Conservation															.																																																											.
Alig confidence															.																																			.	.	.	.	.	.																			.
Template Conservation																																																		.	.	.	.	.	.
Template Sequence		K	T	D	S	I	S	L	F	A	G	I	R	H	D	A	G	D	I	G	Y	L	K	G	L	F	S	Y	G	R	Y	K	N	S	I	S	R	S	T	G	A	D	E	H	A	E	G	S	V	.	.	.	.	.	.	N	G	T	L	M	Q	L	G	A	L	G	G	V	N	V	P	T	G	D	L	T	V	E	G	G	L
Template Known Secondary structure																	T	T	T																					S	S	S								.	.	.	.	.	.
Template Predicted Secondary structure																																																		.	.	.	.	.	.
Template SS confidence
		879	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.							.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.
		611	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.										.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.
Query Sequence		T	R	Y	I	A	E	D	N	E	G	N	A	V	N	P	N	L	P	.	.	.	.	.	.	.	.	.	R	T	T	V	K	M	F	T	S	Y	R	L	P	V	M	P	E	L	T	V	G	G	G	V	N	W	Q	N	R	V	Y	T	D	T	V	T	P	Y	G	T	F	R	A	E	Q	G	S	Y	A	L	V	D	L
Query Conservation																				.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.																																									.	.	.	.	.
Template Conservation																																																																					.	.	.	.	.
Template Sequence		R	Y	D	L	L	K	Q	D	A	F	A	E	K	G	S	A	L	G	W	S	G	N	S	L	T	E	G	T	L	V	G	L	A	G	L	K	L	S	Q	P	L	S	D	K	A	V	L	F	A	T	A	G	V	E	R	D	L	N	G	R	D	Y	T	V	T	G	P	.	.	.	.	.	H	T	R	L	V	A	G	L
Template Known Secondary structure															S		T	T																									S	S	S													S	S										.	.	.	.	.
Template Predicted Secondary structure																																																																					.	.	.	.	.
Template SS confidence
		956	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.						.	.	.	.	.	.	.	1030
		682	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	T	R	Y	Q	V	T	K	N	F	S	L	Q	G	N	V	N	N	L	F	D	K	T	Y	D	T	N	V	E	G	S	I	V	Y	G	T	P	R	N	F	S	I	T	G	T	Y	Q	F
Query Conservation
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	A	D	V	E	F	G	N	G	W	N	G	L	A	R	Y	S	Y	A	G	S	K	Q	Y	G	N	H	.	.	.	.	.	.	.	.	.	.	.	S	G	R	V	G	V	G	Y	R	F
Template Known Secondary structure									T	T													T	T					.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1048	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.												.	.	.	.	.	1080	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions