Job Description P16869 Confidence 74.62% Date Thu Jan 5 11:35:50 GMT 2012 Rank 33 Aligned Residues 175 % Identity 13% Template d1phoa_ SCOP info Transmembrane beta-barrels Porins Porin Resolution 3.00

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		525	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	K	Y	L	A	P	I	T	G	N	N	Y	E	L	G	L	K	S	D	W	M	N	S	R	L	T	T	T	L	A	I	F	R	I	E	Q	D	N	V	A	Q	S	T	G	T	P	I	P	G	S	N	G	E	T	A	Y	K	A	V	D	G	T	V	S	K	G	V	E	F	E	L	N	G	A	I	T	D	N	W
Query Conservation
Alig confidence																																																		.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Template Conservation																																																		.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Template Sequence		E	N	R	D	V	K	K	Q	N	G	D	G	F	G	T	S	L	T	Y	D	F	G	G	S	D	F	A	I	S	G	A	Y	T	N	S	D	R	T	N	E	Q	N	L	Q	S	R	G	T	.	.	.	.	.	.	.	.	.	.	.	.	.	G	K	R	A	E	A	W	A	T	G	L	K	Y	D	A	N	N	.	.
Template Known Secondary structure			S	S		S	T	T		B		S											T	T	T	T														G	G	G	T	T	S	S	S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	S	S														T	T	.	.
Template Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.														210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
		605	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	T	F	G	A	T	R	Y	I	A	E	D	N	E	G	N	A	V	N	P	N	L	P	R	T	T	V	K	M	F	T	S	Y	R	L	P	V	M	P	E	L	T	V	G	G	G	V	N	W	Q	N	R	V	Y	T	D	T	V	T	P	Y	G	T	F	R	A	E	Q	G	S	Y	A	L	V	D	L	F	T	R
Query Conservation
Alig confidence		.																																				.	.																	.	.	.	.	.	.	.
Template Conservation		.																																				.	.																	.	.	.	.	.	.	.
Template Sequence		.	I	Y	L	A	T	F	Y	S	E	T	R	K	M	T	P	I	T	G	G	F	A	N	K	T	Q	N	F	E	A	V	A	Q	Y	Q	F	.	.	D	F	G	L	R	P	S	L	G	Y	V	L	S	K	G	K	.	.	.	.	.	.	.	D	I	E	G	I	G	D	E	D	L	V	N	Y	I	D	V	G	A	T
Template Known Secondary structure		.												S		S			S	S	S	S		S														.	.	S	S	S														.	.	.	.	.	.	.	S	B	T	T	T	B
Template Predicted Secondary structure		.																																				.	.																	.	.	.	.	.	.	.
Template SS confidence
			225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.			260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.								.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
		685	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	Q	V	T	K	N	F	S	L	Q	G	N	V	N	N	L	F	D	K	T	Y	D	T	N	V	E	G	S	I	V	Y	G	T	P	R	N	F	S	I	T	G	T	Y	Q	F
Query Conservation
Alig confidence																.	.	.	.	.
Template Conservation																.	.	.	.	.
Template Sequence		Y	Y	F	N	K	N	M	S	A	F	V	D	Y	K	.	.	.	.	.	I	N	Q	L	D	S	D	N	K	L	N	I	N	N	D	D	I	V	A	V	G	M	T	Y	Q	F
Template Known Secondary structure				S	S	S	S									.	.	.	.	.						S	S		T	T
Template Predicted Secondary structure																.	.	.	.	.
Template SS confidence
		301	.	.	.	.	.	.	.	.	310	.	.	.	.						.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions