Job Description P16869 Confidence 2.44% Date Thu Jan 5 11:35:50 GMT 2012 Rank 69 Aligned Residues 85 % Identity 8% Template d1iwga6 SCOP info Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Resolution 3.50

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		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.			.	.	.	100	.	.	.	.		.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure																				.	.									.
Query SS confidence																				.	.									.
Query Sequence		P	Q	S	V	T	I	V	S	Q	Q	R	M	E	D	Q	Q	L	Q	.	.	T	L	G	E	V	M	E	N	.	T	L	G	I	S	K	S	Q	A	D	S	D	R	A	L	Y	Y	S	R	G	F	Q	I	D	N	Y	M	V	D	G	I	P	T	Y	F	E	S	R	W	N	L	G	D	A	L	S	D	M	A	L	F
Query Conservation																				.	.									.
Alig confidence																				.	.									.
Template Conservation
Template Sequence		P	Q	F	K	I	D	I	D	Q	E	K	A	Q	A	L	G	V	S	I	N	D	I	N	T	T	L	G	A	A	W	G	G	S	Y	V	N	D	F	I	D	R	G	R	V	K	K	V	Y	V	M	S	E	A	K	Y	R	M	L	P	D	D	I	G	D	W	Y	V	R	A	A	D	G	Q	M	V	P	F	S	A	F
Template Known Secondary structure																	T															T										T	T											G	G	G	S	S	S	G	G	G	G	T	T						T	T	S					G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		725	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.
		156	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	R	V	E	V	V	R	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	S	S	R	W	E	Y	G
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		805	.	.	.	.	810	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions