 |
Job Description | P16869 | Confidence | 3.19% | Date | Thu Jan 5 11:35:50 GMT 2012 |
Rank | 62 | Aligned Residues | 34 |
% Identity | 3% | Template | c3s93B_ |
PDB info |
PDB header:transcription | Chain: B: PDB Molecule:tudor domain-containing protein 5; |
PDBTitle: crystal structure of conserved motif in tdrd5
|
Resolution | 2.28 Å |
|
  |   |
91 | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | D | Q | Q | L | Q | T | L | G | E | V | M | E | N | T | L | G | I | S | K | S | Q | A | D | S | D | R | A | L | Y | Y | S | R | G | F |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |
|   |
|   |   |   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|
|   |
|
|   |   |
|
|   |
|
|
|
|
|
|   |
|   | . |   |   |   |   |
|   |   |
|
|   |   |
|
Template Sequence |   |
R | I | L | G | Y | R | S | T | M | E | L | V | L | D | M | P | D | V | V | R | V | C | . |
P | G | A | G | G | T | V | I | L | K | A | I |
Template Known Secondary structure |   |
G | G | G | T |
| S | S |  |  |  |  |  |  | T |
| T | T | T |  |  |  |  | . |  |
| G | G | G |
|  |  |  |  |  |
|
Template Predicted Secondary structure |   |
 |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  | . |  |
|
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
46 | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | |
. | . | 70 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|