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Job DescriptionP16869
Confidence6.03%DateThu Jan 5 11:35:50 GMT 2012
Rank50Aligned Residues141
% Identity11%Templatec3rbhC_
PDB info PDB header:transport proteinChain: C: PDB Molecule:alginate production protein alge; PDBTitle: structure of alginate export protein alge from pseudomonas aeruginosa
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   585....590.........600.........610.........620 .........630........
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Query Sequence  DGTVSKGVEFELNGAITDNWQLTFGATRYIAEDNEG. . . . . . . . . . . . . . . . . . . . . . . . . . NAVNPNLPRTTVKMFTSY
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Template Sequence  GDVNAFGVDLGLRWNIDEQWKAGVGYARGSGGGKDGEEQFQQTGLESNRSNFTGTRSRVHRFGEAFRGELSNLQAATLFG
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SGGGTT




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   305....310.........320.........330.........340.........350.........360.........370.........380....
 
   639640.........650..... ....660.........670.........680.........690. ........
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Query Sequence  RLPVMPELTVGGGVNWQ. . . . . NRVYTDTVTPYGTFRAEQGSYALVDLFTRYQVTKNF. . . . . . . . . . . . . . SLQGNVNN
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Template Sequence  SWQLREDYDASLVYHKFWRVDDDSDIGTSGINAALQPGEKDIGQELDLVVTKYFKQGLLPASXSQYVDEPSALIRFRGGL
Template Known Secondary structure  TTTSSTTS




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TTSGGGGT
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   385....390.........400.........410.........420.........430.........440.........450.........460....
 
   700.........710.........720.........
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Query Sequence  LFDKTYDTNVEGSIVYGTPRNFSITGTYQF
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Template Sequence  FKPGDAYGPGTDSTXH. . . . RAFVDFIWRF
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   465....470.........480 .........490
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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