Job Description P16869 Confidence 6.62% Date Thu Jan 5 11:35:50 GMT 2012 Rank 49 Aligned Residues 142 % Identity 8% Template c3nsgA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:outer membrane protein f; PDBTitle: crystal structure of ompf, an outer membrane protein from salmonella2 typhi Resolution 2.79 Å

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		525	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	K	Y	L	A	P	I	T	G	N	N	Y	E	L	G	L	K	S	D	W	M	N	S	R	L	T	T	T	L	A	I	F	R	I	E	Q	D	N	V	A	Q	S	T	G	T	P	I	P	G	S	N	G	E	T	A	Y	K	A	V	D	G	T	V	S	K	G	V	E	F	E	L	N	G	A	I	T	D	N	W
Query Conservation
Alig confidence																							.	.																									.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.																									.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	D	R	D	G	N	G	D	R	A	E	S	R	A	V	G	A	K	Y	D	A	.	.	N	N	V	Y	L	A	A	V	Y	A	E	T	R	N	X	S	I	V	E	N	T	V	T	D	.	.	.	.	.	.	.	.	.	.	T	V	E	X	A	N	K	T	Q	N	L	E	V	V	A	Q	Y	Q	F	D	F	G	L
Template Known Secondary structure		S	S	S	S	S			S														.	.	T	T											S	S							T	T	T		.	.	.	.	.	.	.	.	.	.						S														T	T	S
Template Predicted Secondary structure																							.	.																									.	.	.	.	.	.	.	.	.	.
Template SS confidence
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220			.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.											.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
		605	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	T	F	G	A	T	R	Y	I	A	E	D	N	E	G	N	A	V	N	P	N	L	P	R	T	T	V	K	M	F	T	S	Y	R	L	P	V	M	P	E	L	T	V	G	G	G	V	N	W	Q	N	R	V	Y	T	D	T	V	T	P	Y	G	T	F	R	A	E	Q	G	S	Y	A	L	V	D	L	F	T	R
Query Conservation
Alig confidence																						.																.	.															.	.	.	.	.	.
Template Conservation																						.																.	.															.	.	.	.	.	.
Template Sequence		R	P	A	I	S	Y	V	Q	S	K	G	K	Q	L	N	G	A	G	G	S	.	A	D	L	A	K	Y	I	Q	A	G	A	T	Y	Y	F	.	.	N	K	N	X	N	V	W	V	D	Y	R	F	N	L	.	.	.	.	.	.	L	D	E	N	D	Y	S	S	S	Y	V	G	T	D	D	Q	A	A	V	G	I	T
Template Known Secondary structure														S		T	T	T	T	S		.																.	.		S	S												.	.	.	.	.	.					S	S		T	T	T	T		S	S
Template Predicted Secondary structure																						.																.	.															.	.	.	.	.	.
Template SS confidence
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.		.	.	290	.	.	.	.	.	.	.	.	.	300	.	.			.	.	.	.	.	.	.	310	.	.	.	.	.	.							.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
		685	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	Q	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	Q	F
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		339	340	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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