Job Description P16869 Confidence 96.17% Date Thu Jan 5 11:35:50 GMT 2012 Rank 22 Aligned Residues 114 % Identity 12% Template c3nb3C_ PDB info PDB header:virus Chain: C: PDB Molecule:outer membrane protein a; PDBTitle: the host outer membrane proteins ompa and ompc are packed at specific2 sites in the shigella phage sf6 virion as structural components Resolution 19.00 Å

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		591	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	E	F	E	L	N	G	A	I	T	D	N	W	Q	L	T	F	G	A	T	R	Y	I	A	E	D	N	E	G	N	A	V	N	P	N	L	P	R	T	T	V	K	M	F	T	S	Y	R	L	P	V	M	P	E	L	T	V	G	G	G	V	N	W	Q	N	R	V	Y	T	D	T	V	T	P	Y	G	T	F	R
Query Conservation
Alig confidence																										.	.	.	.	.	.	.																																		.
Template Conservation																										.	.	.	.	.	.	.																																		.
Template Sequence		G	A	G	A	F	G	G	Y	Q	V	N	P	Y	V	G	F	E	M	G	Y	D	W	L	G	.	.	.	.	.	.	.	R	M	P	Y	A	Y	K	A	Q	G	V	Q	L	T	A	K	L	G	Y	P	I	T	D	D	L	D	I	Y	T	R	L	G	G	.	M	V	W	R	A	D	T	Y	S	N	V	Y	G	K	N
Template Known Secondary structure													T	T												.	.	.	.	.	.	.																					S	S	S	S										.										S	S	S
Template Predicted Secondary structure																										.	.	.	.	.	.	.																																		.
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.								60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.		.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
		671	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	Q	G	S	Y	A	L	V	D	L	F	T	R	Y	Q	V	T	K	N	F	S	L	Q	G	N	V	N	N	L	F	D	K	T	Y	D	T	N	V	E	G	S	I	V	Y	G	T	P	R	N	F	S	I	T	G	T	Y	Q	F
Query Conservation
Alig confidence																														.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	D	T	G	V	S	P	V	F	A	G	G	V	E	Y	A	I	T	P	E	I	A	T	R	L	E	Y	Q	.	.	.	.	.	.	W	T	N	G	M	.	.	.	.	.	.	.	.	.	.	.	L	S	L	G	V	S	Y	R	F
Template Known Secondary structure																				T	T									.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																														.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.							.	.	.	.	.												.	.	150	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions