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Job DescriptionP16869
Confidence97.41%DateThu Jan 5 11:35:50 GMT 2012
Rank18Aligned Residues227
% Identity11%Templatec3brzA_
PDB info PDB header:transport proteinChain: A: PDB Molecule:todx; PDBTitle: crystal structure of the pseudomonas putida toluene2 transporter todx
Resolution3.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   446...450.........460.........470.........480.......
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Query Sequence  QDDTTHMKSLYAATRVTLADPLHLILGARYTNWRVDTLTYSM. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  NSSRLIVLRAPIGFSYQATSKLTFGASVDLVWTSLNLELLLPSSQVGALTAQGNLSGGLVPSLAGFVGTGGAAHFSLSAG
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   128.130.........140.........150.........160.........170.........180.........190.........200.......
 
   488.490.........500.........510........ .520.........530.........540.......
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Query Sequence  . . . EKNHTTPYAGLVFDINDNWSTYASYTSIFQP. . . . . . . . . . . . . . . . . QNDRDSSGKYLAPITGNNYELGLKSDWMN
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Template Sequence  GAVDAVGWGGRLGLTYKLTDNTVLGAMYNFKTSVGDLEGKATLSAISGDGAVLPLDGDIRVKNFEMPASLTLGLAHQF. N
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   212.......220.........230.........240.........250.........260.........270.........280......... 290
 
   548.550.........560.........570.........580........ .590.........600.........610.........620......
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Query Sequence  SRLTTTLAIFRIEQDNVAQSTGTPIPGSNGETAYKAVDGTV. SKGVEFELNGAITDNWQLTFGATRYIAEDNEGNAVNPN
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Template Sequence  ERWVVAADIKRAYWGDVMDSMNVAFISQLGGIDVALPHRYQDITVASIGTAYKYNNDLTLRAGYSYAQLILP. . . . VIPA
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   291........300.........310.........320.........330.........340.........350.........360.. ....
 
   627..630.........640.........650.........660.........670.........680.......
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Query Sequence  LPRTTVKMFTSYRLPVMPELTVGGGVNWQNRVYTDTVTPYGTFRAEQGSYALVDLFTRYQV
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Template Sequence  YLKRHVTFGGEYDF. . DKDSRINLAISFGLRERVMLRQS. . . . . . . . HSQINAVVSYSKNF
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   373......380...... ...390.........400......... 410.........420...
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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