Job Description P16869 Confidence 95.28% Date Thu Jan 5 11:35:50 GMT 2012 Rank 24 Aligned Residues 168 % Identity 14% Template c3bryB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:tbux; PDBTitle: crystal structure of the ralstonia pickettii toluene2 transporter tbux Resolution 3.20 Å

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		532	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590				.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																													.	.	.
Query SS confidence																																																													.	.	.
Query Sequence		I	T	G	N	N	Y	E	L	G	L	K	S	D	W	M	N	S	R	L	T	T	T	L	A	I	F	R	I	E	Q	D	N	V	A	Q	S	T	G	T	P	I	P	G	S	N	G	E	T	A	Y	K	A	V	D	G	T	V	S	K	.	.	.	G	V	E	F	E	L	N	G	A	I	T	D	N	W	Q	L	T	F
Query Conservation																																																													.	.	.
Alig confidence																		.								.																																			.	.	.
Template Conservation																		.								.
Template Sequence		A	W	G	I	G	G	R	L	G	L	T	Y	Q	V	T	P	.	D	T	R	I	G	A	A	.	Y	Q	A	K	T	H	V	G	D	L	T	G	Q	A	T	L	S	A	V	G	N	I	P	L	K	G	D	V	T	V	R	N	F	Q	M	P	A	Q	L	T	V	G	I	S	H	Q	F	N	D	Q	L	S	V	S	A
Template Known Secondary structure																	T	.	T							.					B	B											B																		B												S	S	S	S
Template Predicted Secondary structure																		.								.
Template SS confidence
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.		.	.	.	.	.	.	.		.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
		609	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.																		630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	A	T	R	Y	I	A	E	D	N	E	G	N	A	V	N	P	N	L	P	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	V	K	M	F	T	S	Y	R	L	P	V	M	P	E	L	T	V	G	G	G	V	N	W	Q	N	R	V	Y	T	D	T	V	T	P	Y	G	T	F	R	A
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.																			.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																			.	.																			.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	Y	Q	R	V	F	W	S	S	V	M	K	D	M	N	V	G	F	V	Q	S	G	S	A	A	N	L	D	L	S	L	P	Q	N	Y	R	D	I	S	V	F	G	I	G	A	E	Y	R	Y	.	.	N	A	K	W	T	F	R	G	G	F	H	Y	A	Q	E	T	T	S	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure								G	G	G			S									S	S	S																											.	.		T	T																.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																			.	.																			.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.			.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.
		672	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Q	G	S	Y	A	L	V	D	L	F	T	R	Y	Q	V	T	K	N	F	S	L	Q	G	N	V	N	N	L	F	D	K	T	Y	D	T	N	V	E	G	S	I	V	Y	G	T	P	R	N	F	S	I	T	G	T	Y	Q	F
Query Conservation
Alig confidence		.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	L	T	G	G	V	S	Y	A	I	G	K	N	D	V	I	D	F	A	L	S	V	A	L	R	K	T	S	V	T	H	S	Q	.	.	.	.	.	.	.	.	V	N	A	V	I	A	Y	Q	K	R	F
Template Known Secondary structure		.	.	.	.	.	.	.									S	S	T	T													B								.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.
Template SS confidence
									380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.									.	.	.	.	.	.	.	.	420	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions