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Job DescriptionP16869
Confidence100.00%DateThu Jan 5 11:35:50 GMT 2012
Rank6Aligned Residues644
% Identity27%Templatec1xkwA_
PDB info PDB header:membrane proteinChain: A: PDB Molecule:fe(iii)-pyochelin receptor; PDBTitle: pyochelin outer membrane receptor fpta from pseudomonas2 aeruginosa
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   55....60.........70.........80.........90.........100.........110.........120.........130....
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Query Sequence  DGENDYSVTSTSAGTKMQMTQRDIPQSVTIVSQQRMEDQQLQTLGEVMENTLGISKSQADSDRALYYSRGFQIDNYMVDG
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Template Conservation 
         



 
        
 

 

    
         
 
   


 
         
 


     
 


Template Sequence  ESTSATQPPGVTTLGKVPLKPRELPQSASVIDHERLEQQNLFSLDEAMQQATGVTVQPFQLLTTAYYVRGFKVDSFELDG
Template Known Secondary structure 


TT


TT
B
TTSS
B
GGG
SSTT

BTSTTTTTT

TT
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   56...60.........70.........80.........90.........100.........110.........120.........130.....
 
   135....140.........150.........160.........170.........180.........190.........200.........210....
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Query Sequence  IPTYFESRWNLGDALSDMALFERVEVVRGATGLMTGTGNPSAAINMVRKHATSREFKGDVSAEYGSWNKERYVADLQSPL
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Template Sequence  VPALLGNTA. . . SSPQDMAIYERVEILRGSNGLLHGTGNPAATVNLVRKRPQR. EFAASTTLSAGRWDRYRAEVDVGGPL
Template Known Secondary structure 


SSTT...



B
TTS

TTTT
S

SS



S.S
TTTS
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   136...140.... .....150.........160.........170.........180..... ....190.........200.........210.
 
   215....220.........230.........240.........250.........260.........270.........280.........290....
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Query Sequence  TEDGKIRARIVGGYQNNDSWLDRYNSEKTFFSGIVDADLGDLTTLSAGYEYQRIDVNSPTWGGLPRWNTDGSSNSYDRAR
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Template Conservation                                                                                  
Template Sequence  SASGNVRGRAVAAYEDRDYFYDVADQGTRLLYGVTEFDLSPDTLLTVGAQYQHIDSITNMAGVPMAKDGSNLGLSRDTYL
Template Known Secondary structure  SSSSS
SSSS
TT

SS
B

BTTS





TT


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   212.......220.........230.........240.........250.........260.........270.........280.........290.
 
   295....300.........310.........320.........330.........340.........350.........360.........370....
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Query Sequence  STAPDWAYNDKEINKVFMTLKQQFADTWQATLNATHSEVEFDSKMMYVDAYVNKADGMLVGPYSNYGPGFDYVGGTGWNS
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Template Conservation                                                            .............         
Template Sequence  DVDWDRFKWDTYRAFGSLEQQLGGGWKGKVSAEYQEADSRLRYAGSFGAIDPQTGDGG. . . . . . . . . . . . . QLMGAAYKF
Template Known Secondary structure  B
TT
TTS
B
TTT


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   292.......300.........310.........320.........330.........340......... 350........
 
   375....380.........390.........400.........410.........420.........430.........440.........450....
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Query Sequence  GKRKVDALDLFADGSYELFGRQHNLMFGGSYSKQNNRYFSSWANIFPDEIGSFYNFNGNFPQTDWSPQSLAQDDTTHMKS
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Template Conservation                                                                                  
Template Sequence  KSIQRSLDANLNGPVRLFGLTHELLGGVTYAQGETRQDTARFLNLPNTPVNVYRWDPHGVPRPQIGQYTSPGTTTTTQKG
Template Known Secondary structure  TT
BSS




TTT

SSS




B


B
S

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   359360.........370.........380.........390.........400.........410.........420.........430........
 
   455....460.........470...... ...480.........490.........500.........510.........520.........530...
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Query Sequence  LYAATRVTLADPLHLILGARYT. NWRVDTLTYSMEKNHTTPYAGLVFDINDNWSTYASYTSIFQPQNDRDSSGKYLAPIT
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Template Sequence  LYALGRIKLAEPLTLVVGGRESWWDQDTPATRFKPGRQFTPYGGLIWDFARDWSWYVSYAEVY. . . . . . . . . QPPLSPVE
Template Known Secondary structure  TT
SS




TT.........




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   439440.........450.........460.........470.........480.........490.........500. ........
 
   534.....540.........550.........560.........570.........580.........590.........600.........610...
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Query Sequence  GNNYELGLKSDWMNSRLTTTLAIFRIEQDNVAQSTGTPIPGSNGETAYKAVDGTVSKGVEFELNGAITDNWQLTFGATRY
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Template Conservation      
 
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Template Sequence  GKTYETGIKGELADGRLNLSLAAFRIDLENNPQEDPDHPGPPNNP. FYISGGKVRSQGFELEGTGYLTPYWSLSAGYTYT
Template Known Secondary structure  GGGT
SSS

STT

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TT
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   520.........530.........540.........550.........560.... .....570.........580.........590........
 
   614.....620 .........630.........640... ......650.........660.........670.........680......
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Query Sequence  IAEDNEG. . . . . . NAVNPNLPRTTVKMFTSYRLPVM. PELTVGGGVNWQNRVYTDTVTPYGTFRAEQGSYALVDLFTRYQ
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Template Sequence  STEYLKDSQNDSGTRYSTFTPRHLLRLWSNYDLPWQDRRWSVGGGLQAQSDYSVDYRGV. . . . SMRQGGYALVNMRLGYK
Template Known Secondary structure 
TTS
TT
BS
TTS
S
S


TT....

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   599600.........610.........620.........630.........640.........650....... ..660.........670....
 
   687..690.........700.........710. ........720.........
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Query Sequence  VTKNFSLQGNVNNLFDKTYDTNVEG. . . SIVYGTPRNFSITGTYQF
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Template Conservation        
 
 
 

 
  
               

       
 
Template Sequence  IDEHWTAAVNVNNLFDRTYYQSLSNPNWNNRYGEPRSFNVSLRGAF
Template Known Secondary structure  SSSSSTT






TTS
B




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   675....680.........690.........700.........710.........720
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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