 |
Job Description | P37646 | Confidence | 28.18% | Date | Thu Jan 5 11:56:18 GMT 2012 |
Rank | 180 | Aligned Residues | 110 |
% Identity | 12% | Template | d1w25a2 |
SCOP info | Flavodoxin-like
| CheY-like
| CheY-related
|
Resolution | 2.70 |
|
 |
  |   |
131 | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | F | E | L | V | E | H | I | R | L | P | K | D | S | T | F | A | S | M | C | E | F | G | P | L | W | L | D | D | F | G | T | G | M | A | N | F | S | A | L | S | E | V | R | Y | D | Y | I | K | I | A | R | E | L | F | V | M | L | R | Q | S | P | E | G | R | T | L | F | S | Q | L | L | H | L | M | N | R | Y | C | R |
Query Conservation |   |
  |
|
|
|   |
|   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |
|
|
|
|
|
|
|   |   |   |   |   |   |   |   |
|   |   |
|   |   |
|   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|
|
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |
|   |   | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |
|   |   | . | . | . | . | . |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
R | V | L | I | V | D | D | N | E | R | Q | A | Q | R | V | A | A | E | L | G | V | E | H | R | P | V | I | E | . |
. |
. |
S | D | P | E | K | A | K | I | S | A | G | G | P | V | D | L | V | I | V | N | A | A | . |
. |
. |
. |
. |
A | K | N | F | D | G | L | R | F | T | A | A | L | R | S | E | E | R | T | R | Q | L |
Template Known Secondary structure |   |
 |  |  |  |  |
| S |
|  |  |  |  |  |  |  |  |  |  |  | T | T | T | S |  |  |  |  |  | . | . | . |
|
|  |  |  |  |  |  |  |  |  | S | S |
| S |  |  |  |  |  | T | T | . | . | . | . | . |
| S | S | S |
|  |  |  |  |  |  |  |  |  | T | S | G | G | G | T | T |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  | . | . | . |  |
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
155 | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | |
|
|
. | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | |
|
|
|
|
. | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . |
  |
  |   |
211 | . | . | |
. | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . |
Predicted Secondary structure |   |
 |  |  | . |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | V | I | . |
V | E | G | V | E | T | P | E | E | W | R | D | V | Q | N | S | P | A | F | A | A | Q | G | W | F | L | S | R | P | A | P | I | E | T | L | N | T | A | V |
Query Conservation |   |
  |
|
| . |
|   |
|
|
|
|   |   |   |   |   |   |
|   |   |   |
|
|   |   |   |
|
|   |   |   |   |   |
|   |
|   |   |
|
|   |   |   |   |
Alig confidence |   |
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   | . | . | . | . |
|
|
|   |
|
|   |   |   |   |   |
|   |   |   |
|
Template Sequence |   |
P | V | L | A | M | V | D | P | D | D | R | G | R | M | V | K | A | L | E | I | G | V | N | . |
. |
. |
. |
D | I | L | S | R | P | I | D | P | Q | E | L | S | A | R | V |
Template Known Secondary structure |   |
|  |  |  |  |  |
| T | T |
|  |  |  |  |  |  |  |  |  | T | T |
|
| . | . | . | . |  |  |  |  | S | S |
|
|  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
| . | . | . | . |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
227 | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | |
|
|
|
250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|