 |
Job Description | P37646 | Confidence | 30.89% | Date | Thu Jan 5 11:56:18 GMT 2012 |
Rank | 162 | Aligned Residues | 115 |
% Identity | 16% | Template | d1k68a_ |
SCOP info | Flavodoxin-like
| CheY-like
| CheY-related
|
Resolution | 1.90 |
|
 |
  |   |
131 | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | |
. | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | |
|
|
|
|
|
|
. | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . | . |
|
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | F | E | L | V | E | H | I | R | L | P | K | D | S | T | F | A | S | M | C | E | F | G | . |
P | L | W | L | D | D | F | G | T | G | M | A | N | F | S | A | L | S | E | V | . |
. |
. |
. |
. |
. |
. |
R | Y | D | Y | I | K | I | A | R | E | L | F | V | M | L | R | Q | S | P | E | G | R | T | L | F | S | Q | L | L |
Query Conservation |   |
  |
|
|
|   |
|   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
| . |   |
|
|
|
|
|
|
|   |   |   |   |   |   |   |   |
|   |   |
| . | . | . | . | . | . | . |   |   |
|   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |
|   |   |
|   |
|
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|   | . | . | . | . | . | . |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |
Template Sequence |   |
K | I | F | L | V | E | D | N | K | A | D | I | R | L | I | Q | E | A | L | A | N | S | T | V | P | H | E | V | V | T | V | R | D | G | M | E | A | M | A | Y | L | R | Q | E | G | E | Y | A | N | A | S | R | P | D | L | I | L | L | L | . |
. |
. |
. |
. |
. |
N | L | P | K | K | D | G | R | E | V | L | A | E | I | K |
Template Known Secondary structure |   |
 |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | T |
| S | S |
|
|  |  |  |  |  |
| S |  |  |  |  |  |  |  |  | T | T |
| G | G | G | G | S |
|
|
|
| S |  |  |  |
|
| . | . | . | . | . | . |
|
| S | S | S |
|  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
| . | . | . | . | . | . |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
12 | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | |
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . |
  |
  |   |
203 | . | . | . | . | . | . | 210 | . | . | . | . | |
. | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|  |  |  |  | . |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
H | L | M | N | R | Y | C | R | G | V | I | V | . |
E | G | V | E | T | P | E | E | W | R | D | V | Q | N | S | P | A | F | A | A | Q | G | W | F | L | S | R | P | A | P | I | E | T | L | N | T | A | V | L | A | L |
Query Conservation |   |
  |   |
|   |   |   |
|   |   |
|
|
| . |   |
|
|
|
|   |   |   |   |   |   |
|   |   |   |
|
|   |   |   |
|
|   |   |   |   |   |
|   |
|   |   |
|
|   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |
|
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   | . | . | . | . |   |
|   |
|
|   |   |   |   |   |
|   |   |   |
|   |   |   |
Template Sequence |   |
S | D | P | T | L | K | R | I | P | V | V | V | L | S | T | S | I | N | E | D | D | I | F | H | S | Y | D | L | H | V | N | C | . |
. |
. |
. |
Y | I | T | K | S | A | N | L | S | Q | L | F | Q | I | V | K | G | I |
Template Known Secondary structure |   |
 | S | T | T | G | G | G | S |
|  |  |  |  |  | S |
|
|
|  |  |  |  |  |  |  |  |  | T | T |
| S |  | . | . | . | . |  |  |  |
|
| S | S |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  | . | . | . | . |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
87 | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | |
|
|
|
. | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|