 |
Job Description | P37646 | Confidence | 26.84% | Date | Thu Jan 5 11:56:18 GMT 2012 |
Rank | 187 | Aligned Residues | 72 |
% Identity | 18% | Template | d1h3ga3 |
SCOP info | TIM beta/alpha-barrel
| (Trans)glycosidases
| Amylase, catalytic domain
|
Resolution | 2.1 |
|
 |
  |   |
138 | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | |
|
. | . | . | . | . | . | 160 | |
. | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . |  |  |  |  |  |
|
| . |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | R | L | P | K | D | S | T | F | A | S | M | C | E | F | G | . |
. |
P | L | W | L | D | D | F | . |
G | T | G | M | A | N | F | S | A | L | S | E | V | R | Y | D | Y | I | K | I | A | R | E | L | F | V | M | L | R | Q | S | P | E | G | R | T | L | F | S | Q | L | L | H | L | M | N | R | Y | C | R | G | V | I | V |
Query Conservation |   |
  |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
| . | . |   |
|
|
|
|
|
| . |
|   |   |   |   |   |   |   |   |
|   |   |
|   |   |
|   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |
|   |   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|
|   |   |
|
|
|
|
|
|   |
|
|
|   |   |
|   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |
|   |   |   |
|
|   |   | . | . | . | . | . | . | . | . |   |
|
|   |
|
|
|
|   |
|
|   |   |   |
|   |   |
|
|   |
|
|
|
Template Sequence |   |
D | I | R | G | T | I | D | H | L | D | Y | I | A | G | L | G | F | T | Q | L | W | P | T | P | L | V | E | N | D | A | A | A | Y | S | Y | H | G | Y | A | A | T | D | H | Y | R | I | D | P | R | . |
. |
. |
. |
. |
. |
. |
. |
Y | G | S | N | E | D | F | V | R | L | S | T | E | A | R | K | R | G | X | G | L | I | Q |
Template Known Secondary structure |   |
|  |  |  |  |  |  | T |  |  |  |  |  |  |  | T |
|
|  |  |  |  |
|
|
|  |  |
|
|
| S | S |
| G | G | G |
|
| S |
| S |  |  |  |  |  |
| T | T | . | . | . | . | . | . | . | . | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
146 | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | |
|
|
|
|
|
|
|
. | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . |
  |
  |   |
215 | . | . |
Predicted Secondary structure |   |
 |  |
|
Query SS confidence |   |
|
|
|
Query Sequence |   |
E | G | V |
Query Conservation |   |
  |
|
|
Alig confidence |   |
|
|
|
Template Conservation |   |
|   |
|
Template Sequence |   |
D | V | V |
Template Known Secondary structure |   |
 |  |
|
Template Predicted Secondary structure |   |
 |  |  |
Template SS confidence |   |
|
|
|
  |   |
218 | . | 220 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|