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Job DescriptionP37646
Confidence100.00%DateThu Jan 5 11:56:18 GMT 2012
Rank2Aligned Residues239
% Identity18%Templatec3hv9A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:protein fimx; PDBTitle: crystal structure of fimx eal domain from pseudomonas aeruginosa
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40 .........50.........60.........70.........
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Query Sequence  MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQT. CGRLMAVELLTVVTHPLNPSQRLPPDRYFTEITVSHRME
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Template Sequence  ELAAAAQRGDVIAILQQALETNSFRLL. . . . . . FQPVISLRGDSHENYEVLLRLLN. . PQGQEVPPAEFLHAAKEAGLAE
Template Known Secondary structure  TT
TTTT
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SB
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B

TT
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   433......440.........450......... 460.........470.........480.. .......490.........500....
 
   80.........90... ......100.........110.........120...... ...130.........140... .....
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Query Sequence  VVKEQIDLLAQKAD. . . FFIEHGLLASVNIDGPTLIALRQQPKILRQIER. . . . LPWLRFELVEHIRLPKD. . . . STFAS
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Template Sequence  KIDRWVILNSIKLLAEHRAKGHQTKLFVHLSSASLQDPGLLPWLGVALKAARLPPESLVFQISEADATSYLKQAKQLTQG
Template Known Secondary structure  TT



T
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T
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   505....510.........520.........530.........540.........550.........560.........570.........580....
 
   149150... ......160.........170.........180.........190.........200.........210.........220.......
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Query Sequence  MCEFG. PLWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQ
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Template Sequence  LATLHCQAAISQFGCSLNPFNALKHLTVQFIKIDGSFVQDL. NQVENQEILKGLIAELHEQQKLSIVPFVESASVLATLW
Template Known Secondary structure  TT
T
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   585....590.........600.........610.........620..... ....630.........640.........650.........660...
 
   228.230.........240........
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Query Sequence  NSPAFAAQGWFLSRPAPIETL
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Template Sequence  QAGATYIQGYYLQGPSQAMDY
Template Known Secondary structure  T
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   664.....670.........680....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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