Job Description P37646 Confidence 100.00% Date Thu Jan 5 11:56:18 GMT 2012 Rank 7 Aligned Residues 211 % Identity 15% Template c2w27A_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:ykui protein; PDBTitle: crystal structure of the bacillus subtilis ykui protein,2 with an eal domain, in complex with substrate c-di-gmp and3 calcium Resolution 2.80 Å

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		27	.	.	30	.	.	.	.	.	.	.	.	.	40		.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure																.
Query SS confidence																.
Query Sequence		Q	C	E	R	A	Y	T	W	Q	P	I	Y	Q	T	.	C	G	R	L	M	A	V	E	L	L	T	V	V	T	H	P	L	N	P	S	Q	R	L	P	P	D	R	Y	F	T	E	I	T	V	S	H	R	M	E	V	V	K	E	Q	I	D	L	L	A	Q	K	A	D	F	F	I	E	H	G	L	L	A	S	V	N
Query Conservation																.
Alig confidence																.																.	.
Template Conservation																																.	.
Template Sequence		I	D	D	V	L	P	Y	Y	Q	A	I	F	S	A	E	E	Q	K	V	V	G	Y	E	V	L	G	R	I	L	A	.	.	D	S	E	I	Q	S	L	G	P	F	F	L	D	A	G	I	P	E	E	Y	K	L	E	V	D	N	R	I	I	R	Q	A	L	D	R	F	L	E	A	D	S	D	L	L	I	F	M	N
Template Known Secondary structure		G	G	G											T	T	T		S													.	.	S	S	S				S							T	T	S																					T	T	S		T	T
Template Predicted Secondary structure																																.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40			.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		106	.	.	.	110	.	.			.	.	.	.	.	.	.	120	.	.	.	.					.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.					.	.	.	.	.	.	150	.	.	.		.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure									.	.													.	.	.	.																				.	.	.	.											.
Query SS confidence									.	.													.	.	.	.																				.	.	.	.											.
Query Sequence		I	D	G	P	T	L	I	.	.	A	L	R	Q	Q	P	K	I	L	R	Q	I	.	.	.	.	E	R	L	P	W	L	R	F	E	L	V	E	H	I	R	L	P	K	D	.	.	.	.	S	T	F	A	S	M	C	E	F	G	.	P	L	W	L	D	D	F	G	T	G	M	A	N	F	S	A	L	S	E	V	R
Query Conservation									.	.													.	.	.	.																				.	.	.	.											.
Alig confidence									.	.													.	.	.	.																				.	.	.	.											.
Template Conservation
Template Sequence		Q	D	A	N	L	L	M	L	D	H	G	E	S	F	L	E	L	L	K	E	Y	E	A	K	G	I	E	L	H	R	F	V	L	E	I	T	E	H	N	F	E	G	D	I	E	Q	L	Y	H	M	L	A	Y	Y	R	T	Y	G	I	K	I	A	V	D	N	I	G	K	E	S	S	N	L	D	R	I	A	L	L	S
Template Known Secondary structure								G	G	G	T	T														T			G	G	G							G	G	G			S														T	T	T									T	T	T	B
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	D	Y	I	K	I	A	R	E	L	F	V	M	L	R	Q	S	P	E	G	R	T	L	F	S	Q	L	L	H	L	M	N	R	Y	C	R	G	V	I	V	E	G	V	E	T	P	E	E	W	R	D	V	Q	N	S	P	A	F	A	A	Q	G	W	F	L	S	R	P	A	P
Query Conservation
Alig confidence																			.	.	.	.	.
Template Conservation																			.	.	.	.	.
Template Sequence		P	D	L	L	K	I	D	L	Q	A	L	S	P	S	Y	E	H	.	.	.	.	.	V	L	Y	S	I	S	L	L	A	R	K	I	G	A	A	L	L	Y	E	D	I	E	A	N	F	Q	L	Q	Y	A	W	R	N	G	G	R	Y	F	Q	G	Y	Y	L	V	S	P	S	E
Template Known Secondary structure			S							T	T								.	.	.	.	.													T										S										T	T						S	T	T	T				B	S
Template Predicted Secondary structure																			.	.	.	.	.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.						.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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