Return to main results Retrieve Phyre Job Id

Job DescriptionP0ABY7
Confidence36.74%DateThu Jan 5 11:16:42 GMT 2012
Rank46Aligned Residues42
% Identity17%Templated1bl0a2
SCOP infoDNA/RNA-binding 3-helical bundle Homeodomain-like AraC type transcriptional activator
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   11........20... ......30.... .....40.........50..
Predicted Secondary structure 

.


.







Query SS confidence 












.










.

















Query Sequence  RDIQLAMELITLG. ARLQMLESETQ. LSRGRLIKLYKELRGSPP
Query Conservation      

 


 

.

   
   
 .

     

 

  
 

Alig confidence 












.










.

















Template Conservation 


  
  

  
  

  

   

     
 
 

   
 

Template Sequence  RKMTEIAQKLKESNEPILYLAERYGFESQQTLTRTFKNYFDVPP
Template Known Secondary structure 




TT
S
SS
Template Predicted Secondary structure 











Template SS confidence 











































   63......70.........80.........90.........100......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions