Job Description P0ABY7 Confidence 18.90% Date Thu Jan 5 11:16:42 GMT 2012 Rank 85 Aligned Residues 85 % Identity 8% Template c3mv2A_ PDB info PDB header:protein transport Chain: A: PDB Molecule:coatomer subunit alpha; PDBTitle: crystal structure of a-cop in complex with e-cop Resolution 2.90 Å

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		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.						.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure																																					.																								.	.	.	.	.
Query SS confidence																																					.																								.	.	.	.	.
Query Sequence		M	F	C	N	A	W	Q	F	L	L	K	T	G	L	C	N	G	V	D	A	V	I	K	A	Y	R	L	Y	L	E	Q	C	P	Q	A	.	E	E	G	P	L	L	A	L	T	R	A	W	T	L	V	R	F	V	E	S	G	L	L	.	.	.	.	.	Q	L	S	S	C	N	C	C	G	G	N	F	I	T	H	A
Query Conservation																																					.																								.	.	.	.	.
Alig confidence																																					.																								.	.	.	.	.															.
Template Conservation																																																																																.
Template Sequence		N	F	L	Q	A	S	Y	F	A	G	E	F	L	K	I	I	S	S	G	P	R	A	E	Q	A	R	K	I	K	N	K	A	D	S	M	A	S	D	A	I	P	I	D	F	D	P	Y	A	K	F	D	I	C	A	A	T	Y	K	P	I	Y	E	D	T	P	S	V	S	D	P	L	T	G	S	K	Y	V	I	.	T
Template Known Secondary structure															T	T			S	S															T	S				S	S			S			T	T	S						T	T	T						S	S	S						T	T	T						G	.	G
Template Predicted Secondary structure																																																																																.
Template SS confidence
		1098	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.		.
		149	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		H	Q	P	V	G	S	F	A	C	S	L	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	K	D	K	I	D	R	I	A	M	I	S
Template Known Secondary structure		G	T	T	S	B		S	S	S	S		B
Template Predicted Secondary structure
Template SS confidence
		1177	.	.	1180	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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