Return to main results Retrieve Phyre Job Id

Job DescriptionP0ABY7
Confidence63.45%DateThu Jan 5 11:16:42 GMT 2012
Rank21Aligned Residues40
% Identity15%Templatec3iz6X_
PDB info PDB header:ribosomeChain: X: PDB Molecule:40s ribosomal protein s27 (s27e); PDBTitle: localization of the small subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome
Resolution5.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   135....140.........150.........160 .........170.....
Predicted Secondary structure 























..














Query SS confidence 

























. .














Query Sequence  SSCNCCGGNFITHAHQPVGSFACSLC. . QPPSRAVKRRKLSQN
Query Conservation    
  

  


          

 
..  
 

 
 

    
Alig confidence 















.








..














Template Conservation 


  
    





. 
 
 
  

  
  





 
   
Template Sequence  VKCQGCFNITTVFSHS. QTVVVCPGCQTVLCQPTGGKARLTEG
Template Known Secondary structure 
TTT

TT
.SS



SSS



S


SSS


S
B
Template Predicted Secondary structure 








.












Template SS confidence 










































   37..40.........50.. .......60.........70........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions