Job Description P0ABY7 Confidence 18.25% Date Thu Jan 5 11:16:42 GMT 2012 Rank 87 Aligned Residues 84 % Identity 21% Template c2y0fD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; PDBTitle: structure of gcpe (ispg) from thermus thermophilus hb27 Resolution 2.50 Å

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		58	.	60	.	.	.	.	.		.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.									.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure										.																								.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.																								.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	F	S	T	D	W	F	M	.	T	W	E	Q	N	V	H	A	S	M	F	C	N	A	W	Q	F	L	L	K	T	G	L	.	.	.	.	.	.	.	.	C	N	G	V	D	A	V	I	K	A	Y	R	L	Y	L	E	Q	C	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation										.																								.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.																								.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	E	P	K	S	A	H	E	V	V	L	E	A	L	V	E	S	A	V	R	A	Y	E	A	A	L	E	M	G	L	G	E	D	K	L	V	L	S	A	K	V	S	K	A	R	D	L	V	W	V	Y	R	E	L	A	R	R	T	Q	A	P	L	H	L	G	L	T	E	A	G	M	G	V	K	G	I	V	A	S	A
Template Known Secondary structure		S	S																														G	G	G							B	S	S																	S		B				B					S	S
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
											108	.	110	.	.	.	.	.	.	.	.	.													120	.	.	.	.	.	.	.	.			.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.										.	.
Query SS confidence		.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.										.	.
Query Sequence		.	.	.	.	.	.	.	.	.	Q	A	E	E	G	P	L	L	A	L	T	R	.	.	.	.	.	.	.	.	.	.	.	.	A	W	T	L	V	R	F	V	E	.	.	S	G	L	L	Q	L	S	S	C	N	C	C	G
Query Conservation		.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.										.	.
Alig confidence		.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.										.	.
Template Conservation
Template Sequence		A	A	L	A	P	L	L	L	E	G	I	G	D	T	I	R	V	S	L	T	P	S	P	K	E	P	R	T	K	E	V	E	V	A	Q	E	I	L	Q	A	L	G	L	R	A	F	A	P	E	V	T	S	C	P	G	C	G
Template Known Secondary structure											T			S									S	T	T			T	T												T	T	T	S	S		S	S										S
Template Predicted Secondary structure
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions