Job Description P0ABY7 Confidence 100.00% Date Thu Jan 5 11:16:42 GMT 2012 Rank 2 Aligned Residues 156 % Identity 100% Template c2avuF_ PDB info PDB header:transcription activator Chain: F: PDB Molecule:flagellar transcriptional activator flhc; PDBTitle: structure of the escherichia coli flhdc complex, a2 prokaryotic heteromeric regulator of transcription Resolution 3.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	I	V	Q	E	A	R	D	I	Q	L	A	M	E	L	I	T	L	G	A	R	L	Q	M	L	E	S	E	T	Q	L	S	R	G	R	L	I	K	L	Y	K	E	L	R	G	S	P	P	P	K	G	M	L	P	F	S	T	D	W	F	M	T	W	E	Q	N	V	H	A	S	M	F	C	N	A	W	Q	F	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	I	V	Q	E	A	R	D	I	Q	L	A	M	E	L	I	T	L	G	A	R	L	Q	M	L	E	S	E	T	Q	L	S	R	G	R	L	I	K	L	Y	K	E	L	R	G	S	P	P	P	K	G	M	L	P	F	S	T	D	W	F	M	T	W	E	Q	N	V	H	A	S	M	F	C	N	A	W	Q	F	L	L
Template Known Secondary structure																			T				S	T	T							S														S	S											S	G	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		K	T	G	L	C	N	G	V	D	A	V	I	K	A	Y	R	L	Y	L	E	Q	C	P	Q	A	E	E	G	P	L	L	A	L	T	R	A	W	T	L	V	R	F	V	E	S	G	L	L	Q	L	S	S	C	N	C	C	G	G	N	F	I	T	H	A	H	Q	P	V	G	S	F	A	C	S	L	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	T	G	L	C	N	G	V	D	A	V	I	K	A	Y	R	L	Y	L	E	Q	C	P	Q	A	E	E	G	P	L	L	A	L	T	R	A	W	T	L	V	R	F	V	E	S	G	L	L	Q	L	S	S	C	N	C	C	G	G	N	F	I	T	H	A	H	Q	P	V	G	S	F	A	C	S	L	C
Template Known Secondary structure				T	S			S															S				T	T	S		S	S														T	T	S							S	S	S								S	S			S	S					S
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions