Job Description P60723 Confidence 100.00% Date Thu Jan 5 12:07:06 GMT 2012 Rank 3 Aligned Residues 198 % Identity 30% Template d2j01f1 SCOP info Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4 Resolution 2.8

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	V	L	K	D	A	Q	S	A	L	T	V	S	E	T	T	F	G	R	D	F	N	E	A	L	V	H	Q	V	V	V	A	Y	A	A	G	A	R	Q	G	T	R	A	Q	K	T	R	A	E	V	T	G	S	G	K	K	P	W	R	Q	K	G	T	G	R	A	R	S	G	S	I	K	S	P	I	W	R	S	G
Query Conservation
Alig confidence																.
Template Conservation																.
Template Sequence		Q	I	P	V	L	S	P	S	G	R	R	E	L	A	.	A	D	L	P	A	E	I	N	P	H	L	L	W	E	V	V	R	W	Q	L	A	K	R	R	R	G	T	A	S	T	K	T	R	G	E	V	A	Y	S	G	R	K	I	W	P	Q	K	H	T	G	R	A	R	H	G	D	I	G	A	P	I	F	V	G	G
Template Known Secondary structure					S	S	S								S	.	T	T	S	S	S																		T										T	T	T	S							S	S		S	S	S	S	S	S						T	T	S	T	T	S	T	T	S
Template Predicted Secondary structure																.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.		.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.		.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																																																																.
Query SS confidence																																																																.
Query Sequence		G	V	T	F	A	A	R	P	Q	D	H	S	Q	K	V	N	K	K	M	Y	R	G	A	L	K	S	I	L	S	E	L	V	R	Q	D	R	L	I	V	V	E	K	F	S	V	E	A	P	K	T	K	L	L	A	Q	K	L	K	D	M	A	L	.	E	D	V	L	I	I	T	G	E	L	D	E	N	L	F	L	A
Query Conservation																																																																.
Alig confidence																																																																.
Template Conservation
Template Sequence		G	V	V	F	G	P	K	P	R	D	Y	S	Y	T	L	P	K	K	V	R	K	K	G	L	A	M	A	V	A	D	R	A	R	E	G	K	L	L	L	V	E	A	F	A	G	V	N	G	K	T	K	E	F	L	A	W	A	K	E	A	G	L	D	G	S	E	S	V	L	L	V	T	G	N	E	L	V	R	R	A
Template Known Secondary structure				S	S																														T	T												S	S													T			S	S	S							S
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	N	L	H	K	V	D	V	R	D	A	T	G	I	D	P	V	S	L	I	A	F	D	K	V	V	M	T	A	D	A	V	K	Q	V	E	E	M	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	R	N	L	P	W	V	V	T	L	A	P	E	G	L	N	V	Y	D	I	V	R	T	E	R	L	V	M	D	L	D	A	W	E	V	F	Q	N	R	I
Template Known Secondary structure			T	T		T	T						G	G	G									S	S															T
Template Predicted Secondary structure
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions