Job Description P60723 Confidence 100.00% Date Thu Jan 5 12:07:06 GMT 2012 Rank 6 Aligned Residues 198 % Identity 20% Template d1vqoc1 SCOP info Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4 Resolution 2.20

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		1	.	.	.	.	.	.	.	.	10	.					.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.			.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure													.	.	.	.																																									.	.
Query SS confidence													.	.	.	.																																									.	.
Query Sequence		M	E	L	V	L	K	D	A	Q	S	A	.	.	.	.	L	T	V	S	E	T	T	F	G	R	D	F	N	E	A	L	V	H	Q	V	V	V	A	Y	A	A	G	A	R	Q	G	T	R	A	Q	K	T	R	A	E	.	.	V	T	G	S	G	K	K	P	W	R	Q	K	G	T	G	R	A	R	S	G	S	I	K
Query Conservation													.	.	.	.																																									.	.
Alig confidence													.	.	.	.						.																																			.	.
Template Conservation																						.
Template Sequence		M	Q	A	T	I	Y	D	L	D	G	N	T	D	G	E	V	D	L	P	D	.	V	F	E	T	P	V	R	S	D	L	I	G	K	A	V	R	A	A	Q	A	N	R	K	Q	D	Y	G	S	D	E	Y	A	G	L	R	T	P	A	E	S	F	G	S	G	R	G	Q	A	H	V	P	K	L	D	G	R	A	R	R
Template Known Secondary structure									T	T	S										G	.	G	G	G	S																		T								T	T	T	T	T					B				S	S	S	S								T	T				S
Template Predicted Secondary structure																						.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20		.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.														.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure																	.																														.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.																														.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	P	I	W	R	S	G	G	V	T	F	A	A	R	P	.	Q	D	H	S	Q	K	V	N	K	K	M	Y	R	G	A	L	K	S	I	L	S	E	L	V	R	Q	D	R	L	.	.	.	.	.	.	.	.	.	.	.	.	.	I	V	V	E	K	F	S	V	E	A	P	K	T	K	L	L	A	Q	K	L	K	D
Query Conservation																	.																														.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.																														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	P	Q	A	V	K	G	R	S	A	H	P	P	K	T	E	K	D	R	S	L	D	L	N	D	K	E	R	Q	L	A	V	R	S	A	L	A	A	T	A	D	A	D	L	V	A	D	R	G	H	E	F	D	R	D	E	V	P	V	V	V	S	D	D	F	E	D	L	V	K	T	Q	E	V	V	S	L	L	E	A
Template Known Secondary structure		S	T	T	S	T	T				S	S				T	T																							T	T									T						S	S		S					G	G	G	G	G													T
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		141	.	.																									.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.					.	.	.	.	190	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.	.	.	.
Query Sequence		M	A	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	D	V	L	I	I	T	G	E	L	D	E	N	L	F	L	A	A	R	N	L	H	K	V	D	V	R	D	A	T	G	I	D	P	V	S	L	I	A	F	D	K	.	.	.	.	V	V	M	T	A	D	A
Query Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.	.	.	.
Template Conservation
Template Sequence		L	D	V	H	A	D	I	D	R	A	D	E	T	K	I	K	A	G	Q	G	S	A	R	G	R	K	Y	R	R	P	A	S	I	L	F	V	T	S	D	E	P	S	T	A	A	R	N	L	A	G	A	D	V	A	T	A	S	E	V	N	T	E	D	L	A	P	G	G	A	P	G	R	L	T	V	F	T	E	S	A
Template Known Secondary structure		T	T		T						T	S						S	S	G	G	G	G	G	T														S	S	S			T	T	T	T	T	S	T	T						T	T	T							S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		193	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	K	Q	V	E	E	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	A	E	V	A	E	R
Template Known Secondary structure						T	T
Template Predicted Secondary structure
Template SS confidence
		240	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions