Job Description P60723 Confidence 100.00% Date Thu Jan 5 12:07:06 GMT 2012 Rank 12 Aligned Residues 147 % Identity 35% Template d1dmga_ SCOP info Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4 Resolution 1.70

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		2	.	.	.	.	.	.	.	10	.					.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.
Query SS confidence												.	.	.	.
Query Sequence		E	L	V	L	K	D	A	Q	S	A	.	.	.	.	L	T	V	S	E	T	T	F	G	R	D	F	N	E	A	L	V	H	Q	V	V	V	A	Y	A	A	G	A	R	Q	G	T	R	A	Q	K	T	R	A	E	V	T	G	S	G	K	K	P	W	R	Q	K	G	T	G	R	A	R	S	G	S	I	K	S	P	I
Query Conservation												.	.	.	.
Alig confidence												.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	V	D	L	L	N	V	K	G	E	K	V	G	T	L	E	I	S	D	F	V	F	N	I	D	P	N	Y	D	V	M	W	R	Y	V	D	M	Q	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure								T	T	S														S	S																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.			.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure																																																																					.	.
Query SS confidence																																																																					.	.
Query Sequence		W	R	S	G	G	V	T	F	A	A	R	P	Q	D	H	S	Q	K	V	N	K	K	M	Y	R	G	A	L	K	S	I	L	S	E	L	V	R	Q	D	R	L	I	V	V	E	K	F	S	V	E	A	P	K	T	K	L	L	A	Q	K	L	K	D	M	A	L	E	.	.	D	V	L	I	I	T	G	E	L	D	E
Query Conservation																																																																					.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																																																								.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	S	D	W	S	K	K	L	N	K	K	M	K	K	L	A	L	R	S	A	L	S	V	K	Y	R	E	N	K	L	L	V	L	D	D	L	K	L	E	R	P	K	T	K	S	L	K	E	I	L	Q	N	L	Q	L	S	D	K	K	T	L	I	V	L	P	W	K	E	E
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																										T	T						S					S	S													T	T		T	T	S										S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
														42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
					156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.																.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure		.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	N	L	F	L	A	A	R	N	L	H	K	V	D	V	R	D	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	G	I	D	P	V	S	L	I	A	F	D	K	V	V	M	T	A	D	A	V	K	Q	V	E	E	M	L	A
Query Conservation		.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	Y	M	N	V	K	L	S	G	R	N	L	P	D	V	K	V	I	I	A	D	N	P	N	N	S	K	N	G	E	K	A	V	R	I	D	G	L	N	V	F	D	M	L	K	Y	D	Y	L	V	L	T	R	D	M	V	S	K	I	E	E	V	L	G
Template Known Secondary structure											T	T		T	T										S	S			S	S							T	T									S	S
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions