Job Description P37637 Confidence 99.97% Date Thu Jan 5 11:56:09 GMT 2012 Rank 5 Aligned Residues 195 % Identity 73% Template d1iwga7 SCOP info Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain Resolution 3.50

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		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320				.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380
Predicted Secondary structure																			.	.	.
Query SS confidence																			.	.	.
Query Sequence		R	A	V	K	E	E	L	N	R	L	S	A	Y	F	P	A	S	.	.	.	L	K	T	V	Y	P	Y	D	T	T	P	F	I	E	I	S	I	Q	E	V	F	K	T	L	V	E	A	I	I	L	V	F	L	V	M	Y	L	F	L	Q	N	F	R	A	T	I	I	P	T	I	A	V	P	V	V	I	L	G	T	F
Query Conservation																			.	.	.
Alig confidence																			.	.	.
Template Conservation
Template Sequence		R	P	I	F	A	W	V	I	A	I	I	I	M	L	A	G	G	L	A	I	L	K	L	P	V	A	Q	Y	P	T	P	F	V	K	I	S	I	H	E	V	V	K	T	L	V	E	A	I	I	L	V	F	L	V	M	Y	L	F	L	Q	N	F	R	A	T	L	I	P	T	I	A	V	P	V	V	L	L	G	T	F
Template Known Secondary structure																						T	T	S				S	S																													T	T				T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		381	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	L	S	A	V	G	F	T	I	N	T	L	T	M	F	G	M	V	L	A	I	G	L	L	V	D	D	A	I	V	V	V	E	N	V	E	R	V	I	A	E	D	K	L	P	P	K	E	A	T	H	K	S	M	G	Q	I	Q	R	A	L	V	G	I	A	V	V	L	S	A	V	F	M	P	M	A	F	M	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	V	L	A	A	F	G	F	S	I	N	T	L	T	M	F	G	M	V	L	A	I	G	L	L	V	D	D	A	I	V	V	V	E	N	V	E	R	V	M	A	E	E	G	L	P	P	K	E	A	T	R	K	S	M	G	Q	I	Q	G	A	L	V	G	I	A	M	V	L	S	A	V	F	V	P	M	A	F	F	G
Template Known Secondary structure						T	T	T			S																																	T	S			S							G	G	G	T																	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		381	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460
		461	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	T	G	E	I	Y	R	Q	F	S	I	T	L	I	S	S	M	L	L	S	V	F	V	A	M	S	L	T	P	A	L	C	A	T	I	L	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	S	T	G	A	I	Y	R	Q	F	S	I	T	I	V	S	A	M	A	L	S	V	L	V	A	L	I	L	T	P	A	L	C	A	T	M	L	K
Template Known Secondary structure		T	T	S																						T	T	T									S
Template Predicted Secondary structure
Template SS confidence
		461	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions