Job Description P37637 Confidence 99.67% Date Thu Jan 5 11:56:09 GMT 2012 Rank 7 Aligned Residues 98 % Identity 39% Template d1iwga2 SCOP info Ferredoxin-like Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Resolution 3.50

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure																																								.
Query SS confidence																																								.
Query Sequence		A	S	I	I	V	Q	T	R	L	Q	T	P	E	E	F	G	K	I	L	L	K	V	Q	Q	D	G	S	Q	V	L	L	R	D	V	A	R	V	E	.	L	G	A	E	D	Y	S	T	V	A	R	Y	N	G	K	P	A	A	G	I	A	I	K	L	A	A	G	A	N	A	L	D	T	S	R	A	V	K	E	E	L
Query Conservation																																								.
Alig confidence																							.																	.
Template Conservation																							.
Template Sequence		V	G	V	I	N	T	D	G	T	M	T	Q	E	D	I	S	D	Y	V	A	A	.	N	M	K	D	A	I	S	R	T	S	G	V	G	D	V	Q	L	F	G	S	Q	N	Y	D	I	I	A	E	F	N	G	Q	P	A	S	G	L	G	I	K	L	A	T	G	A	N	A	L	D	T	A	A	A	I	R	A	E	L
Template Known Secondary structure							S	S	S				T	T							T	T	.	T	T					T	T	S	T	T		S					S	S					S						T	T												T	T			T											T
Template Predicted Secondary structure																							.
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160		.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
Predicted Secondary structure
Query SS confidence
Query Sequence		N	R	L	S	A	Y	F	P	A	S	L	K	T	V	Y	P	Y	D	T	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	K	M	E	P	F	F	P	S	G	L	K	I	V	Y	P	Y	D	T	T
Template Known Secondary structure		T	T	T	G	G	G			T	T							S
Template Predicted Secondary structure
Template SS confidence
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions