Return to main results Retrieve Phyre Job Id

Job DescriptionQ1PI83
Confidence99.36%DateThu Jan 5 12:33:32 GMT 2012
Rank20Aligned Residues140
% Identity39%Templated3adka_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Nucleotide and nucleoside kinases
Resolution2.10

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.. .......70.........
Predicted Secondary structure 



















.





Query SS confidence 





























































.
















Query Sequence  QFIMEKYGIPQISTGDMLRAAVKSGSELGKQAKDIMDAGKLVTDELVIALVKERIAQEDCRN. GFLLDGFPRTIPQADAM
Query Conservation   


   
   

 




 

   
  
  
      
  


 
   

   
       .
 







  

  
Alig confidence 





























































.
















Template Conservation    

  
    
                                                     
              
Template Sequence  EKIVQKYGYTHLSTGDLLRAEVSSGSARGKMLSEIMEKGQLVPLETVLDMLRDAMVAKVDTSKGFLIDGYPREVKQGEEF
Template Known Secondary structure  T

T
TTT



TTTTT
S
S

SS
Template Predicted Secondary structure 





















Template SS confidence 















































































   26...30.........40.........50.........60.........70.........80.........90.........100.....
 
   80.........90.........100.........110.........120.........130.........140.........150.........
Predicted Secondary structure 














































Query SS confidence 















































































Query Sequence  KEAGINVDYVLEFDVPDELIVDRIVGRRVHAPSGRVYHVKFNPPKVEGKDDVTGEELTTRKDDQEETVRKRLVEYHQMTA
Query Conservation           

 
      
  

  
      
  
      
            
  
 

  
 
  

  
     
Alig confidence 


























...........................

























Template Conservation                        
   
...........................                          
Template Sequence  ERKIGQPTLLLYVDAGPETMTKRLLKR. . . . . . . . . . . . . . . . . . . . . . . . . . . GETSGRVDDNEETIKKRLETYYKATE
Template Known Secondary structure  T


S

...........................T




STTT
Template Predicted Secondary structure 
















...........................






Template SS confidence 















































































   106...110.........120.........130.. .......140.........150........
 
   160.......
Predicted Secondary structure 
Query SS confidence 







Query Sequence  PLIGYYSK
Query Conservation 

   
 
Alig confidence 







Template Conservation          
Template Sequence  PVIAFYEK
Template Known Secondary structure  TT
Template Predicted Secondary structure 
Template SS confidence 







   159160......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions