Return to main results Retrieve Phyre Job Id

Job DescriptionQ1PI83
Confidence99.59%DateThu Jan 5 12:33:32 GMT 2012
Rank12Aligned Residues157
% Identity49%Templatec2rh5B_
PDB info PDB header:transferaseChain: B: PDB Molecule:adenylate kinase; PDBTitle: structure of apo adenylate kinase from aquifex aeolicus
Resolution2.48 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
Predicted Secondary structure 

























Query SS confidence 















































































Query Sequence  QFIMEKYGIPQISTGDMLRAAVKSGSELGKQAKDIMDAGKLVTDELVIALVKERIAQEDCRNGFLLDGFPRTIPQADAMK
Query Conservation   


   
   

 




 

   
  
  
      
  


 
   

   
       
 







  

  
 
Alig confidence 
























































...



















Template Conservation    

  
    
      
                                      ...    
               
Template Sequence  KRLAKEKGFVHISTGDILREAVQKGTPLGKKAKEYMERGELVPDDLIIALIEEVFPK. . . HGNVIFDGFPRTVKQAEALD
Template Known Secondary structure 


T
TT



T

S...S

S


S
Template Predicted Secondary structure 














...








Template SS confidence 















































































   18.20.........30.........40.........50.........60.........70.... .....80.........90....
 
   81. .......90.........100.........110.........120.........130.........140.........150......
Predicted Secondary structure  ....














































Query SS confidence 

. . . .









































































Query Sequence  EA. . . . GINVDYVLEFDVPDELIVDRIVGRRVHAPSGRVYHVKFNPPKVEGKDDVTGEELTTRKDDQEETVRKRLVEYHQ
Query Conservation    ....      

 
      
  

  
      
  
      
            
  
 

  
 
  

  
  
Alig confidence 

....











































.......






















Template Conservation                           
                        ....... 
         
           
Template Sequence  EMLEKKGLKVDHVLLFEVPDEVVIERLSGRRINPETGEVYHVKYNPPPPG. . . . . . . VKVIQREDDKPEVIKKRLEVYRE
Template Known Secondary structure  TTT





T
TTT

TTTB


TT.......


B

GGGS
Template Predicted Secondary structure 























.......




Template SS confidence 















































































   95....100.........110.........120.........130.........140.... .....150.........160.......
 
   157..160.......
Predicted Secondary structure 
Query SS confidence 










Query Sequence  MTAPLIGYYSK
Query Conservation     

   
 
Alig confidence 










Template Conservation             
Template Sequence  QTAPLIEYYKK
Template Known Secondary structure  T
Template Predicted Secondary structure 
Template SS confidence 










   168.170........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions