Job Description P04805 Confidence 99.89% Date Thu Jan 5 10:58:21 GMT 2012 Rank 29 Aligned Residues 286 % Identity 15% Template d1rqga2 SCOP info Adenine nucleotide alpha hydrolase-like Nucleotidylyl transferase Class I aminoacyl-tRNA synthetases (RS), catalytic domain Resolution 2.90

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		1	.			.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.		.	.	.	.	.	.	.	.	30	.	.						.	.	.	.	.	.	.	40	.	.	.														.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.																				.												.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence				.	.																				.												.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	K	.	.	I	K	T	R	F	A	P	S	P	T	G	Y	L	H	V	G	G	A	R	.	T	A	L	Y	S	W	L	F	A	R	N	.	.	.	.	.	H	G	G	E	F	V	L	R	I	E	D	.	.	.	.	.	.	.	.	.	.	.	.	.	T	D	L	E	R	S	T	P	E	A	I	E	A	I	M	D
Query Conservation				.	.																				.												.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.																				.												.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	V	R	Y	M	V	T	S	A	L	P	Y	A	N	G	P	I	H	A	G	H	L	A	G	A	Y	L	P	A	D	I	F	V	R	Y	L	R	L	K	G	E	D	V	V	F	I	C	G	T	D	E	H	G	T	P	I	S	F	R	A	L	K	E	G	R	S	P	R	E	I	V	D	E	F	H	E	Q	I	K	I
Template Known Secondary structure													B	T	T	S			B								T													T	T										B			S											T
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		60	.	.	.	.	.	.	.	.	.	70	.	.	.		.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.																																		.	100	.	.	.	.	.
Predicted Secondary structure																.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	M	N	W	L	S	L	E	W	D	E	G	P	Y	.	Y	Q	T	K	R	F	D	R	Y	N	A	V	I	D	Q	M	L	E	E	G	T	A	Y	K	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	C	S	K	E	R	L
Query Conservation																.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	F	Q	R	A	K	I	S	F	D	F	F	G	R	T	E	L	P	I	H	Y	K	L	S	Q	E	F	F	L	K	A	Y	E	N	G	H	L	V	K	K	V	T	K	Q	A	Y	C	E	H	D	K	M	F	L	P	D	R	F	A	I	C	G	R	P	I	S	F	R	D	S	A	H	Y	Y	I	K	M	Q	D	F
Template Known Secondary structure							T				S					T	T	S																	T	T												B	T	T	T	T	B				T	T				S																G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.				.	.	.	.	180	.	.
Predicted Secondary structure																																																																								.	.	.
Query SS confidence																																																																								.	.	.
Query Sequence		E	A	L	R	E	E	Q	M	A	K	G	E	K	P	R	Y	D	G	R	C	R	H	S	H	E	H	H	A	D	D	E	P	C	V	V	R	F	A	N	P	Q	E	G	S	V	V	F	D	D	Q	I	R	G	P	I	E	F	S	N	Q	E	L	D	D	L	I	I	R	R	T	.	.	.	D	G	S	P	T	Y	N
Query Conservation																																																																								.	.	.
Alig confidence																																																																								.	.	.
Template Conservation
Template Sequence		A	E	R	L	K	R	W	I	E	K	Q	P	W	K	P	N	V	K	N	M	V	L	S	W	I	E	E	G	L	E	E	R	A	I	T	R	D	L	N	W	G	I	P	V	P	L	D	E	E	D	M	K	G	K	V	L	Y	V	W	F	E	A	P	I	G	Y	I	S	I	T	I	E	H	F	K	R	I	G	K	P
Template Known Secondary structure											S	S															T	T												S	S	S		B		S				S	S	S	T	T									G	G	G													T	T		T
Template Predicted Secondary structure
Template SS confidence
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
		183	.	.	.	.	.	.	190	.	.	.				.	.	.	.	.	.	200	.	.					.	.	.	.	.	.	.	210	.	.	.	.	.	.	.								.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.										.	.	.	.																.	.	.	.	.	.	.
Query SS confidence													.	.	.										.	.	.	.																.	.	.	.	.	.	.
Query Sequence		F	C	V	V	V	D	D	W	D	M	E	.	.	.	I	T	H	V	I	R	G	E	D	.	.	.	.	H	I	N	N	T	P	R	Q	I	N	I	L	K	A	L	.	.	.	.	.	.	.	K	A	P	V	P	V	Y	A	H	V	S	M	I	N	G	D	D	G	K	K	L	S	K	R	H	G	A	V	S	V	M
Query Conservation													.	.	.										.	.	.	.																.	.	.	.	.	.	.
Alig confidence													.	.	.										.	.	.	.																.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	E	W	K	K	Y	W	L	N	I	D	G	Q	T	R	V	I	H	F	I	G	K	D	N	I	P	F	H	A	I	F	W	P	A	F	L	M	A	Y	G	K	Y	K	D	E	E	V	E	A	E	W	N	L	P	Y	D	I	P	A	N	E	Y	L	T	L	E	G	K	K	F	S	T	S	R	N	W	A	I	W	V
Template Known Secondary structure		T	T	T					B		S	S											G	G	G						T								T	T			B		S	S	S			B		B				S	B										T	T				B	T	T	T	T	B	S		B
Template Predicted Secondary structure
Template SS confidence
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Y	R	D	D	G	Y	L	P	E	A	L	L	N	Y	L	V	R	L	G	W	S	H	G	D	Q	E	I	F	T	R	E	E	M	I	K	Y	F	T
Query Conservation
Alig confidence																						.
Template Conservation																						.
Template Sequence		H	E	F	L	D	V	F	P	A	D	Y	L	R	Y	Y	L	T	T	I	M	.	P	E	T	R	D	S	D	F	S	F	S	D	F	K	V	R	I	N
Template Known Secondary structure					T	T	T	S												T		.		S	S	S
Template Predicted Secondary structure																						.
Template SS confidence
		356	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.		.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions