Job Description P04805 Confidence 99.80% Date Thu Jan 5 10:58:21 GMT 2012 Rank 36 Aligned Residues 271 % Identity 17% Template d1iq0a2 SCOP info Adenine nucleotide alpha hydrolase-like Nucleotidylyl transferase Class I aminoacyl-tRNA synthetases (RS), catalytic domain Resolution 2.30

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		2	.	.	.	.	.	.		.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.						.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure									.																								.	.	.	.	.
Query SS confidence									.																								.	.	.	.	.
Query Sequence		K	I	K	T	R	F	A	.	P	S	P	T	G	Y	L	H	V	G	G	A	R	T	A	L	Y	S	W	L	F	A	R	.	.	.	.	.	N	H	G	G	E	F	V	L	R	I	E	D	T	D	L	E	R	S	T	P	E	A	I	E	A	I	M	D	G	M	N	W	L	S	L	E	W	D	E	G	P	Y	Y	Q
Query Conservation									.																								.	.	.	.	.
Alig confidence									.																								.	.	.	.	.															.	.	.	.	.	.
Template Conservation																																																				.	.	.	.	.	.
Template Sequence		V	V	L	V	E	H	T	S	V	N	P	N	K	E	L	H	V	G	H	L	R	N	I	A	L	G	D	A	I	A	R	I	L	A	Y	A	G	R	E	V	L	V	L	N	Y	I	D	D	T	G	.	.	.	.	.	.	R	Q	A	A	E	T	L	F	A	L	R	H	Y	G	L	T	W	D	G	K	E	K	Y	D
Template Known Secondary structure												T	T	S			B																				T	T											T	T	S	.	.	.	.	.	.													T	T					S	S	S
Template Predicted Secondary structure																																																				.	.	.	.	.	.
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.							.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
		76	.	.	.	80	.	.										.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.			110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130											.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.																												.	.																						.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.																												.	.																						.	.	.	.	.	.	.	.	.	.
Query Sequence		T	K	R	F	D	R	Y	.	.	.	.	.	.	.	.	.	N	A	V	I	D	Q	M	L	E	E	G	T	A	Y	K	C	Y	C	S	K	E	R	L	E	A	L	R	.	.	E	E	Q	M	A	K	G	E	K	P	R	Y	D	G	R	C	R	H	S	H	E	.	.	.	.	.	.	.	.	.	.	H	H	A	D
Query Conservation									.	.	.	.	.	.	.	.	.																												.	.																						.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.																												.	.																						.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	F	A	G	R	A	Y	V	R	L	H	Q	D	P	E	Y	E	R	L	Q	P	A	I	E	E	V	L	H	A	L	E	R	G	E	L	R	E	E	V	N	R	I	L	L	A	Q	M	A	T	M	H	A	L	N	A	R	Y	D	L	L	V	W	E	S	D	I	V	R	A	G	L	L	Q	K	A	L	A	L	L	E
Template Known Secondary structure															T	T	T	G	G	G													T	T	T	T																		T	T				S											T	T										T
Template Predicted Secondary structure
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	E	P	C	V	V	R	F	A	N	P	Q	E	G	S	V	V	F	D	D	Q	I	R	G	P	I	E	F	S	N	Q	E	L	D	D	L	I	I	R	R	T	D	G	S	P	T	Y	N	F	C	V	V	V	D	D	W	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.																						.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.																						.
Template Sequence		Q	S	P	H	V	F	R	P	R	E	G	K	Y	A	G	A	L	V	M	D	A	S	P	.	.	.	V	I	P	G	L	E	D	P	F	F	V	L	L	R	S	N	G	T	A	T	Y	.	Y	A	K	D	I	A	F	Q	F	W	K	M	G	I	L	E	G	L	R	F	R	P	Y	E	N	P	Y	Y	P	G	L	R
Template Known Secondary structure		T	S	T	T					S	S	S	T	T	T	T							T	T	.	.	.	T	S		S		S									T	T	S		B			.												T	T	S	S											S	S		T	T
Template Predicted Secondary structure																									.	.	.																						.
Template SS confidence
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280				.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.		.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
														192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220			.	.	.	.	.	.			.	.	.	230	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																														.	.							.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.																														.	.							.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	M	E	I	T	H	V	I	R	G	E	D	H	I	N	N	T	P	R	Q	I	N	I	L	K	A	L	K	A	P	.	.	V	P	V	Y	A	H	.	.	V	S	M	I	N	G	D	D	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.																														.	.							.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																														.	.							.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	S	A	P	E	G	E	A	Y	T	P	K	A	E	E	T	I	N	V	V	D	V	R	Q	S	H	P	Q	A	L	V	R	A	A	L	A	L	A	G	Y	P	A	L	A	E	K	A	H	H	L	A	Y	E	T	V	L	L	E	G	R	Q	M	S	G	A	V	S	V	D	E	V	L	E	E	A	T	R	R	A	R
Template Known Secondary structure															S								S	S	S														T	T						T	T												T	T	B		S					B
Template Predicted Secondary structure
Template SS confidence
		334	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	K	L	S	K	R	H	G	A	V	S	V	M	Q	Y	R	D	D	G	Y	L	P	E	A	L	L	N	Y	L	V	R	L	G	W	S	H	G	D	Q	E	I	F	T	R	E	E	M	I	K
Query Conservation
Alig confidence																																		.	.
Template Conservation																																		.	.
Template Sequence		A	I	V	E	E	K	N	P	D	H	P	D	K	E	E	A	A	R	M	V	A	L	G	A	I	R	F	S	M	V	K	T	.	.	E	P	K	K	Q	I	D	F	R	Y	Q	E	A	L	S
Template Known Secondary structure									T	T		S																					S	.	.		T	T	S
Template Predicted Secondary structure																																		.	.
Template SS confidence
		418	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.			450	.	.	.	.	.	.	.	.	.	460	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions