Job Description P04805 Confidence 100.00% Date Thu Jan 5 10:58:21 GMT 2012 Rank 8 Aligned Residues 286 % Identity 23% Template d1gtra2 SCOP info Adenine nucleotide alpha hydrolase-like Nucleotidylyl transferase Class I aminoacyl-tRNA synthetases (RS), catalytic domain Resolution 2.50

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	K	T	R	F	A	P	S	P	T	G	Y	L	H	V	G	G	A	R	T	A	L	Y	S	W	L	F	A	R	N	H	G	G	E	F	V	L	R	I	E	D	T	D	L	E	R	S	T	P	E	A	I	E	A	I	M	D	G	M	N	W	L	S	L	E	W	D	E	G	P	Y	Y	Q	T	K	R	F	D	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	V	H	T	R	F	P	P	E	P	N	G	Y	L	H	I	G	H	A	K	S	I	C	L	N	F	G	I	A	Q	D	Y	K	G	Q	C	N	L	R	F	D	D	T	N	P	V	K	E	D	I	E	Y	V	E	S	I	K	N	D	V	E	W	L	G	F	H	W	S	G	N	V	R	Y	S	S	D	Y	F	D	Q
Template Known Secondary structure		S									S	S	S			B																	T	T												G	G	G																T	T				S	S	S				G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.									.	.	.	.	.	.	140	.	.	.	.	.		.	.	.	.	150	.	.
Predicted Secondary structure																																																						.	.	.	.	.	.	.	.													.
Query SS confidence																																																						.	.	.	.	.	.	.	.													.
Query Sequence		Y	N	A	V	I	D	Q	M	L	E	E	G	T	A	Y	K	C	Y	C	S	K	E	R	L	E	A	L	R	E	E	Q	M	A	K	G	E	K	P	R	Y	D	G	R	C	R	H	S	H	E	H	H	A	.	.	.	.	.	.	.	.	D	D	E	P	C	V	V	R	F	A	N	P	.	Q	E	G	S	V	V	F
Query Conservation																																																						.	.	.	.	.	.	.	.													.
Alig confidence																																																						.	.	.	.	.	.	.	.													.
Template Conservation
Template Sequence		L	H	A	Y	A	I	E	L	I	N	K	G	L	A	Y	V	D	E	L	T	P	E	Q	I	R	E	Y	R	G	T	L	T	Q	P	G	K	N	S	P	Y	R	D	R	S	V	E	E	N	L	A	L	F	E	K	M	R	A	G	G	F	E	E	G	K	A	C	L	R	A	K	I	D	M	A	S	P	F	I	V	M
Template Known Secondary structure												T	T	S															T			S	S	S						T	T	T	T																T		S		T	T	S							S		T	T		S	S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	D	Q	I	R	G	P	I	E	F	S	N	Q	E	L	D	D	L	I	I	R	R	T	D	G	S	P	T	Y	N	F	C	V	V	V	D	D	W	D	M	E	I	T	H	V	I	R	G	E	D	H	I	N	N	T	P	R	Q	I	N	I	L	K	A	L	K	A	P	V	P	V	Y	A	H	V	S	M	I	N	G
Query Conservation
Alig confidence															.	.	.
Template Conservation															.	.	.
Template Sequence		R	D	P	V	L	Y	R	I	K	F	A	E	H	.	.	.	H	Q	T	G	N	K	W	C	I	Y	P	M	Y	D	F	T	H	C	I	S	D	A	L	E	G	I	T	H	S	L	C	T	L	E	F	Q	D	N	R	R	L	Y	D	W	V	L	D	N	I	T	I	P	V	H	P	R	Q	Y	E	F	S	R	L	N
Template Known Secondary structure		S	S											B	.	.	.	T	T	T	B	T	S		S																	T		S						G	G	G	T	T	T											S			S
Template Predicted Secondary structure															.	.	.
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.				.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
		233	.	.	.	.	.	.	240	.	.	.	.	.																	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.		.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.
Query Sequence		D	D	G	K	K	L	S	K	R	H	G	A	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	V	M	Q	Y	R	D	D	G	Y	L	P	E	A	L	L	N	Y	L	V	R	L	G	W	S	H	G	D	Q	E	.	I	F	T	R	E	E	M	I	K	Y	F	T	L	N	A
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.
Template Conservation
Template Sequence		L	E	Y	T	V	M	S	K	R	K	L	N	L	L	V	T	D	K	H	V	E	G	W	D	D	P	R	M	P	T	I	S	G	L	R	R	R	G	Y	T	A	A	S	I	R	E	F	C	K	R	I	G	V	T	K	Q	D	N	T	I	E	M	A	S	L	E	S	C	I	R	E	D	L	N	E
Template Known Secondary structure		B	T	T	S													T	T	S	S	S	S	T	T		T	T	S		B								T																	S	S				B
Template Predicted Secondary structure
Template SS confidence
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions