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Job DescriptionP04805
Confidence99.85%DateThu Jan 5 10:58:21 GMT 2012
Rank33Aligned Residues257
% Identity19%Templated1ffya3
SCOP infoAdenine nucleotide alpha hydrolase-like Nucleotidylyl transferase Class I aminoacyl-tRNA synthetases (RS), catalytic domain
Resolution2.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30. ........40..... ....50..
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Query Sequence  IKTRFAPSPTGYLHVGGARTALYSWLFAR. . . . . NHGGEFVLRIEDTD. . . . . . . . . . . . . . . . . . . . . . . . . LERSTPE
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Template Sequence  ILHDGPPYANGNLHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPIEQALTKKGVDRKKMSTAEFREKCKEFALE
Template Known Secondary structure 




BSSS


TTT
B




B

ST

STTT
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   51........60.........70.........80.........90.........100.........110.........120.........130
 
   53......60.........70...... ...80.........90.........100.........110.........120.........
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Query Sequence  AIEAIMDGMNWLSLEWDEGPYYQT. . . KRFDRYNAVIDQMLEEGTAYKCYCSKERLEALREEQMAKGEKPRYDGRCRHSH
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Template Sequence  QIELQKKDFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGKKP. . . . . . . . . . . . . . . . . VYWSPSSESSL
Template Known Secondary structure  TTT

S
TTS
TTSTT
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   131........140.........150.........160.........170.........180.. .......190...
 
   130.........140.........150.......
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Query Sequence  EHHADDEPCVVRFANPQEGSVVFDDQIR. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  AEAEIEYPHDWRTKKPVIFRATPQWFASISKVRQDILDAIENTNFKVNWGKTRIYNMVRDRGEWVISRQRVWGVPLPVFY
Template Known Secondary structure 
GGG

TTT

B

TSSS



S
SSS
B


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   194.....200.........210.........220.........230.........240.........250.........260.........270...
 
   158.160.........170.........180. ....
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GPIEFSNQELDDLIIRRTDGSPTY. . . . . . . . . . . . . . . NFCV
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Template Sequence  AENGEIIMTKETVNHVADLFAEHGSNIWFEREAKDLLPEGFTHPGSPNGTFTKETDIMDVWFDSGSSHRGVLETRPELSF
Template Known Secondary structure 
TTS



TS
SSTT


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TTS





TTTTTSTT

S
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   468.470.........480.........490.........500.........510.........520.........530.........540.......
 
   186...190.........200.........210.........220.. .......230.........240.........250.........260...
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Query Sequence  VVDDWDMEITHVIRGEDHINNTPRQINILKALKAPVP. . VYAHVSMINGDDGKKLSKRHGAVSVMQYRDDGYLPEALLNY
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Template Sequence  PADMYLEGSDQYRG. . . . . . WFNSSITTSVATRGVSPYKFLLSHGFVMDGEGKKMSKSLGNVIVPDQVVKQKGADIARLW
Template Known Secondary structure  SBSGGGGTT......SS
SBS


TTS



SSSS



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   548.550.........560. ........570.........580.........590.........600.........610.........620.
 
   264.....270.........280....
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Query Sequence  LVRLGWSHGDQEIFTREEMIK
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Template Sequence  VSS. . TDYLADVRISDEILKQ
Template Known Secondary structure  T..S
TTS


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   622.. .....630.........640
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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