Job Description P04805 Confidence 98.32% Date Thu Jan 5 10:58:21 GMT 2012 Rank 57 Aligned Residues 159 % Identity 20% Template c3prhB_ PDB info PDB header:ligase Chain: B: PDB Molecule:tryptophanyl-trna synthetase; PDBTitle: tryptophanyl-trna synthetase val144pro mutant from b. subtilis Resolution 2.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.							.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70		.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.																				.
Query SS confidence																																											.	.	.	.	.	.																				.
Query Sequence		P	T	G	Y	L	H	V	G	G	A	R	T	A	L	Y	S	W	L	F	A	R	N	H	G	G	E	F	V	L	R	I	E	D	T	D	L	E	R	S	T	P	.	.	.	.	.	.	E	A	I	E	A	I	M	D	G	M	N	W	L	S	L	E	W	D	E	.	G	P	Y	Y	Q	T	K	R	F	D	R	Y	N
Query Conservation																																											.	.	.	.	.	.																				.
Alig confidence																								.																			.	.	.	.	.	.																				.
Template Conservation																								.
Template Sequence		P	S	G	S	V	T	L	G	N	Y	I	G	A	M	K	Q	F	V	E	L	Q	H	.	D	Y	N	S	Y	F	C	I	V	D	Q	H	A	I	T	V	P	Q	D	R	L	E	L	R	K	N	I	R	N	L	A	A	L	Y	L	A	V	G	L	D	P	E	K	A	T	L	F	I	Q	S	E	V	P	A	H	A	Q
Template Known Secondary structure				S			B							T							T	T	T	.	T	S												T	T	S																					T	T			T	T	T	S					G	G	G		T
Template Predicted Secondary structure																								.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.		.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	I	D	Q	M	L	E	E	G	T	A	Y	K	C	Y	C	S	K	E	R	L	E	A	L	R	E	E	Q	M	A	K	G	E	K	P	R	Y	D	G	R	C	R	H	S	H	E	H	H	A	D	D	E	P	C	V	V	R	F	A	N	P	Q	E	G	S	V	V	F	D	D	Q	I	R	G	P	I	E	F	S
Query Conservation
Alig confidence					.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation					.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	G	W	.	.	.	.	.	.	.	.	M	M	Q	C	V	A	Y	I	G	E	L	E	R	M	V	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure					.	.	.	.	.	.	.	.				T	T	S											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure					.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		90	.	.									.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.							220	.	.	.	.	.	.	.	.	.	230		.	.	.	.	.	.
Predicted Secondary structure																																																										.	.	.	.	.	.												.
Query SS confidence																																																										.	.	.	.	.	.												.
Query Sequence		N	Q	E	L	D	D	L	I	I	R	R	T	D	G	S	P	T	Y	N	F	C	V	V	V	D	D	W	D	M	E	I	T	H	V	I	R	G	E	D	H	I	N	N	T	P	R	Q	I	N	I	L	K	A	L	K	A	.	.	.	.	.	.	P	V	P	V	Y	A	H	V	S	M	I	.	N	G	D	D	G	K
Query Conservation																																																										.	.	.	.	.	.												.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.	.	.	.	.												.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	G	L	L	T	Y	P	P	L	M	A	A	D	I	L	L	Y	G	T	D	L	V	P	P	G	E	D	Q	K	Q	H	L	E	L	T	R	N	L	A	E	R	F	N	K	K	Y	N	D	I	F	T	I	P	E	V	K	I	A	R	I	M	S	L	N	D	P	L	K
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.				T											T	T	T								T	T																			T															B		S	S		T	T	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
															122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
		237	.	.	240	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	S	K	R	H	G	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	M	S	K	S	D	P	N
Template Known Secondary structure		B			T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		193	.	.	.	.	.	.	200

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions