Job Description P04805 Confidence 98.06% Date Thu Jan 5 10:58:21 GMT 2012 Rank 60 Aligned Residues 174 % Identity 14% Template c3p0jD_ PDB info PDB header:ligase Chain: D: PDB Molecule:tyrosyl-trna synthetase; PDBTitle: leishmania major tyrosyl-trna synthetase in complex with tyrosinol,2 triclinic crystal form 1 Resolution 2.89 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.						.	.	.	.					.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70		.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.					.	.	.	.																								.								.	.	.
Query SS confidence																																			.	.	.	.	.					.	.	.	.																								.								.	.	.
Query Sequence		P	T	G	Y	L	H	V	G	G	A	R	T	A	L	Y	S	W	L	F	A	R	N	H	G	G	E	F	V	L	R	I	E	D	.	.	.	.	.	T	D	L	E	.	.	.	.	R	S	T	P	E	A	I	E	A	I	M	D	G	M	N	W	L	S	L	E	W	D	E	.	G	P	Y	Y	Q	T	K	.	.	.
Query Conservation																																			.	.	.	.	.					.	.	.	.																								.								.	.	.
Alig confidence																																			.	.	.	.	.					.	.	.	.																								.								.	.	.
Template Conservation
Template Sequence		P	S	G	R	M	H	I	A	Q	G	I	F	K	A	V	N	V	N	K	C	T	A	A	G	C	E	F	V	F	W	V	A	D	W	F	A	L	M	N	D	K	V	G	G	E	L	E	K	I	R	I	V	G	R	Y	L	I	E	V	W	K	A	A	G	M	D	M	D	K	V	L	F	L	W	S	S	E	E	I	T
Template Known Secondary structure				S	S		B																		T																T		S	T	T																				T			G	G	G
Template Predicted Secondary structure
Template SS confidence
		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
			78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	R	F	D	R	Y	N	A	V	I	D	Q	M	L	E	E	G	T	A	Y	K	C	Y	C	S	K	E	R	L	E	A	L	R	E	E	Q	M	A	K	G	E	K	P	R	Y	D	G	R	C	R	H	S	H	E	H	H	A	D	D	E	P	C	V	V	R	F	A	N	P	Q	E	G	S	V	V	F	D	D	Q	I
Query Conservation		.
Alig confidence		.																	.	.	.	.	.	.	.																				.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.																				.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	H	A	D	T	Y	W	R	M	V	L	D	I	G	R	Q	N	.	.	.	.	.	.	.	T	I	A	R	I	K	K	C	C	T	I	M	G	K	T	E	G	T	L	.	.	.	.	.	.	.	T	A	A	Q	V	L	Y	P	L	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T	T														T	S	.	.	.	.	.	.	.							T	T					T	S			S	S		.	.	.	.	.	.	.		S	S		S						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																			.	.	.	.	.	.	.																				.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.								.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.								.	.	.	160	.	.	.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220		.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure																																																																		.
Query SS confidence																																																																		.
Query Sequence		R	G	P	I	E	F	S	N	Q	E	L	D	D	L	I	I	R	R	T	D	G	S	P	T	Y	N	F	C	V	V	V	D	D	W	D	M	E	I	T	H	V	I	R	G	E	D	H	I	N	N	T	P	R	Q	I	N	I	L	K	A	L	K	A	P	.	V	P	V	Y	A	H	V	S	M	I	N	G	D	D	G
Query Conservation																																																																		.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	C	C	D	I	F	F	L	K	A	D	I	C	Q	L	G	L	D	Q	R	K	V	N	M	L	A	R	E	Y	C	D	L	I	G	R	K	L	K	P	V	I	L	S	H	H	M	L	A	G	L	K	Q
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								T	T		S					B	G	G	G															T										B						S	S	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																														167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
		236			.	.	.	240	.	.		.	.	.	.
Predicted Secondary structure			.	.							.
Query SS confidence			.	.							.
Query Sequence		K	.	.	K	L	S	K	R	H	.	G	A	V	S
Query Conservation			.	.							.
Alig confidence			.	.							.
Template Conservation
Template Sequence		G	Q	A	K	M	S	K	S	D	P	D	S	A	I
Template Known Secondary structure		T		S	S			S	S		G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		219	220	.	.	.	.	.	.	.	.	.	230	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions