Return to main results Retrieve Phyre Job Id

Job DescriptionP04805
Confidence95.40%DateThu Jan 5 10:58:21 GMT 2012
Rank82Aligned Residues79
% Identity8%Templatec3i05B_
PDB info PDB header:ligaseChain: B: PDB Molecule:tryptophanyl-trna synthetase; PDBTitle: tryptophanyl-trna synthetase from trypanosoma brucei
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   11... .....20.........30.........40... ......50.........60......... 70.........80.
Predicted Secondary structure 



.





.......












.




Query SS confidence 



.




























. . . . . . .

























.











Query Sequence  PTGY. LHVGGARTALYSWLFARNHGGEFVLRIED. . . . . . . TDLERSTPEAIEAIMDGMNWLSLEWD. EGPYYQTKRFDR
Query Conservation 


 .



  
  
     

   
 



 

....... 
  
 
      
   
  


  
.     

 
   
Alig confidence 



.




























.......

























.











Template Conservation 


  




 
     
 

   
    
 
 
    
       
      
   
 

 
 

 

 
  

     
Template Sequence  PSSESMHMGHLIPFMFTKWLQDSFRVPLVIQMTDDEKFYFRNIPMEQVEAMTTENIKDIIAMGFDPELTFIFRDFDYMGC
Template Known Secondary structure 

SS

BGGGST


S


TTT

TTSTTT
Template Predicted Secondary structure 























Template SS confidence 















































































   81........90.........100.........110.........120.........130.........140.........150.........160
 
   82.......
Predicted Secondary structure 
Query SS confidence 







Query Sequence  YNAVIDQM
Query Conservation 
      
Alig confidence 







Template Conservation         
Template Sequence  MYRTVAKI
Template Known Secondary structure  S
Template Predicted Secondary structure 
Template SS confidence 







   161.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions