Job Description P04805 Confidence 99.94% Date Thu Jan 5 10:58:21 GMT 2012 Rank 23 Aligned Residues 270 % Identity 19% Template c3c8zB_ PDB info PDB header:ligase Chain: B: PDB Molecule:cysteinyl-trna synthetase; PDBTitle: the 1.6 a crystal structure of mshc: the rate limiting2 enzyme in the mycothiol biosynthetic pathway Resolution 1.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.		.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.						.	.	.	.	.	.	.	.	40	.	.	.	.	.														.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.
Predicted Secondary structure							.																										.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence							.																										.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	I	K	T	R	.	F	A	P	S	P	T	G	Y	L	H	V	G	G	A	R	T	A	L	Y	S	W	L	F	A	R	.	.	.	.	.	N	H	G	G	E	F	V	L	R	I	E	D	T	D	.	.	.	.	.	.	.	.	.	.	.	.	.	L	E	R	S	T	P	E	A	I	E	A	I	M	D	G	M	N
Query Conservation							.																										.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.																										.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	A	T	M	Y	V	C	G	I	T	P	Y	D	A	T	H	L	G	H	A	A	T	Y	L	T	F	D	L	V	H	R	L	W	L	D	A	G	H	T	V	Q	Y	V	Q	N	V	T	D	V	D	D	P	L	F	E	R	A	E	R	D	G	I	D	W	R	T	L	G	D	R	E	T	Q	L	F	R	E	D	M	A
Template Known Secondary structure		S										T	T	S			B																				T	T												S												T
Template Predicted Secondary structure
Template SS confidence
		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	L	S	L	E	W	D	E	G	P	Y	Y	Q	T	K	R	F	D	R	Y	N	A	V	I	D	Q	M	L	E	E	G	T	A	Y	K	C	Y	C	S	K	E	R	L	E	A	L	R	E	E	Q	M	A	K	G	E	K	P	R	Y	D	G	R	C	R	H	S	H	E	H	H	A	D	D	E	P	C	V	V	R	F
Query Conservation
Alig confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	L	R	V	L	P	P	H	D	Y	V	A	A	T	D	A	I	A	E	V	V	E	M	V	E	K	L	L	A	S	G	A	A	Y	I	V	E	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	E	Y	P	D	V	Y	F
Template Known Secondary structure			T	T					S					G	G	G																T	S					S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	S
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.																																			.	.	.	.	.	160	.	.
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.																					.	.	.	.	.	.	.	170	.	.	.	.			.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.														.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.														.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	N	P	Q	E	G	S	V	V	F	D	D	Q	I	R	G	P	I	E	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	N	Q	E	L	D	D	L	I	I	R	R	.	.	T	D	G	S	P	T	Y	N	F	C	V	V	V	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.														.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.	.	.
Template Sequence		R	A	D	A	T	A	Q	.	.	.	.	.	.	.	F	G	Y	E	S	G	Y	D	R	D	T	M	L	T	L	F	A	E	R	G	G	D	P	D	R	P	G	K	S	D	Q	L	D	A	L	L	W	R	A	E	R	P	G	E	P	S	W	P	S	P	F	G	R	G	R	P	G	W	H	V	E	C	S	A	I	A
Template Known Secondary structure			T	T	S	S	T	T	.	.	.	.	.	.	.	T	T	T	T	T														T	T			T	T		T	T		S	S	T	T										T	T	S			B			T	T		S
Template Predicted Secondary structure									.	.	.	.	.	.	.
Template SS confidence
		163	.	.	.	.	.	.								170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
			188	.	190	.	.	.	.	.	.	.	.	.	200	.	.					.	.	.	.	.	.	.	210	.	.	.	.	.	.	.			.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure		.																.	.	.	.																.	.
Query SS confidence		.																.	.	.	.																.	.
Query Sequence		.	D	D	W	D	M	E	I	T	H	V	I	R	G	E	D	.	.	.	.	H	I	N	N	T	P	R	Q	I	N	I	L	K	A	L	.	.	K	A	P	V	P	V	Y	A	H	V	S	M	I	N	G	D	D	G	K	K	L	S	K	R	H	G	A	V	S	V	M	Q	Y	R	D	D	G	Y	L	P	E	A	L
Query Conservation		.																.	.	.	.																.	.
Alig confidence		.																.	.	.	.										.	.	.				.	.																												.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																															.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	T	R	I	G	T	G	L	D	I	Q	G	G	G	S	D	L	I	F	P	H	H	E	Y	S	A	A	H	A	.	.	.	E	S	V	T	G	E	R	R	F	A	R	H	Y	V	H	T	G	M	I	G	V	L	V	S	Q	L	R	A	Q	G	V	D	.	.	.	.	.	.	.	.	.	.	.	.	P	S	A	I
Template Known Secondary structure					T		T	T								G	G	G	T	T	T										.	.	.							S		S		S								B			B							T	T			.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																															.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.				.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.													.	.	.	300
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.						.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.
Query SS confidence																													.	.	.	.	.
Query Sequence		L	N	Y	L	V	R	L	G	W	S	H	G	D	Q	E	I	F	T	R	E	E	M	I	K	Y	F	T	.	.	.	.	.	L	N	A	V	S	K	S	A	S	A	F	N	T	D	K	L	L	W	L	N	H	H	Y	I	N	A	L	P	P	E	Y	V	A	T	H	L	Q	W	H	I	E	Q
Query Conservation																													.	.	.	.	.
Alig confidence						.	.																						.	.	.	.	.
Template Conservation						.	.
Template Sequence		R	L	G	L	.	.	F	S	G	H	Y	R	E	D	R	F	W	S	N	E	V	L	D	E	A	N	A	R	L	A	R	W	R	S	A	T	A	L	P	E	A	P	D	A	T	D	V	I	A	R	V	R	Q	Y	L	A	D	D	L	D	T	P	K	A	L	A	A	L	D	G	W	C	T	D
Template Known Secondary structure						.	.		T	S		T	T	S		B																						T	S	S	S	B	S															B	T
Template Predicted Secondary structure						.	.
Template SS confidence
		314	.	.	.			.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions