Job Description P04805 Confidence 100.00% Date Thu Jan 5 10:58:21 GMT 2012 Rank 13 Aligned Residues 283 % Identity 29% Template c3aiiA_ PDB info PDB header:ligase Chain: A: PDB Molecule:glutamyl-trna synthetase; PDBTitle: archaeal non-discriminating glutamyl-trna synthetase from2 methanothermobacter thermautotrophicus Resolution 1.65 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	K	T	R	F	A	P	S	P	T	G	Y	L	H	V	G	G	A	R	T	A	L	Y	S	W	L	F	A	R	N	H	G	G	E	F	V	L	R	I	E	D	T	D	L	E	R	S	T	P	E	A	I	E	A	I	M	D	G	M	N	W	L	S	L	E	W	D	E	G	P	Y	Y	Q	T	K	R	F	D	R
Query Conservation
Alig confidence																																																																							.
Template Conservation																																																																							.
Template Sequence		E	V	V	L	R	F	A	P	N	P	S	G	P	L	H	I	G	H	A	R	A	A	I	L	N	H	E	Y	A	R	K	Y	D	G	R	L	I	L	R	I	E	D	T	D	P	R	R	V	D	P	E	A	Y	D	M	I	P	A	D	L	E	W	L	G	V	E	W	D	E	.	T	V	I	Q	S	D	R	M	E	T
Template Known Secondary structure											S	S	S	S		B																	T	T												G	G	G			T	T													T				S		.				G	G	G	G
Template Predicted Secondary structure																																																																							.
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.		.	.	.	.	.	170	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.			.	.	.	140	.	.	.	.	.		.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																									.	.										.
Query SS confidence																																																									.	.										.
Query Sequence		Y	N	A	V	I	D	Q	M	L	E	E	G	T	A	Y	K	C	Y	C	S	K	E	R	L	E	A	L	R	E	E	Q	M	A	K	G	E	K	P	R	Y	D	G	R	C	R	H	S	H	E	H	H	A	D	D	E	.	.	P	C	V	V	R	F	A	N	P	.	Q	E	G	S	V	V	F	D	D	Q	I	R	G
Query Conservation																																																									.	.										.
Alig confidence																																																									.	.										.
Template Conservation
Template Sequence		Y	Y	E	Y	T	E	K	L	I	E	R	G	G	A	Y	V	C	T	C	R	P	E	E	F	R	E	L	K	N	R	G	E	A	C	H	C	R	S	L	G	F	R	E	N	L	Q	R	W	R	E	M	F	E	M	K	E	G	S	A	V	V	R	V	K	T	D	L	N	H	P	N	P	A	I	R	D	W	V	S	M
Template Known Secondary structure												T	T	S						S											T	T				G	G	G	G													G	G	G	S		T	T	S									T	T		S	S	G	G	G	T	T
Template Predicted Secondary structure
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	I	E	F	S	N	Q	E	L	D	D	L	I	I	R	R	T	D	G	S	P	T	Y	N	F	C	V	V	V	D	D	W	D	M	E	I	T	H	V	I	R	G	E	D	H	I	N	N	T	P	R	Q	I	N	I	L	K	A	L	K	A	P	V	P	V	Y	A	H	V	S	M	I	N	G	D	D	G	K	K	L
Query Conservation
Alig confidence									.	.	.																																	.	.	.	.	.																								.
Template Conservation									.	.	.																																	.	.	.	.	.																								.
Template Sequence		R	I	V	E	A	E	H	.	.	.	P	R	T	G	T	R	Y	R	V	Y	P	M	M	N	F	S	V	A	V	D	D	H	L	L	G	V	T	H	V	L	R	A	.	.	.	.	.	N	R	E	K	Q	E	Y	L	Y	R	H	L	G	W	E	P	P	E	F	I	H	Y	G	.	R	L	K	T	S	G	A	R	E
Template Known Secondary structure						S		B	.	.	.	T	T	T	B	T	S																		T	T								.	.	.	.	.													T											.		B
Template Predicted Secondary structure									.	.	.																																	.	.	.	.	.																								.
Template SS confidence
		255	.	.	.	.	260	.				.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.						.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.		.	.	.	320	.	.	.	.	.
		239	240	.	.	.	.	.	.										.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.	.	.
Query Sequence		S	K	R	H	G	A	V	S	.	.	.	.	.	.	.	.	.	V	M	Q	Y	R	D	D	G	Y	L	P	E	A	L	L	N	Y	L	V	R	L	G	W	S	H	G	D	Q	E	I	F	T	R	E	E	M	I	K	Y	F	T	L	N	A	V	S	K	S	A	S	A	F	N	T	D	K	L	L	W	L	N	H	H
Query Conservation										.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	I	L	R	G	E	Y	S	G	W	D	D	P	R	L	G	T	L	R	A	I	A	R	R	G	I	R	P	E	A	I	R	K	L	M	V	E	I	G	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	I	A	D	S	T	M	S	W	K	K	I	Y	G	L	N	R	S
Template Known Secondary structure						S	S			S	T	T		T	T	S		B							T	T														T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S		B
Template Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.																							.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.
		310	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	I	N	A	L	P	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	L	E	E	E	A	R
Template Known Secondary structure				T	T	T
Template Predicted Secondary structure
Template SS confidence
		396	.	.	.	400	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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