Job Description P04805 Confidence 98.07% Date Thu Jan 5 10:58:21 GMT 2012 Rank 59 Aligned Residues 185 % Identity 14% Template c2quiB_ PDB info PDB header:ligase Chain: B: PDB Molecule:tryptophanyl-trna synthetase; PDBTitle: crystal structures of human tryptophanyl-trna synthetase in2 complex with tryptophanamide and atp Resolution 2.40 Å

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		11	.	.	.		.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.								.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70		.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure						.																														.	.	.	.	.	.	.																												.
Query SS confidence						.																														.	.	.	.	.	.	.																												.
Query Sequence		P	T	G	Y	.	L	H	V	G	G	A	R	T	A	L	Y	S	W	L	F	A	R	N	H	G	G	E	F	V	L	R	I	E	D	.	.	.	.	.	.	.	T	D	L	E	R	S	T	P	E	A	I	E	A	I	M	D	G	M	N	W	L	S	L	E	W	D	E	.	G	P	Y	Y	Q	T	K	R	F	D	R
Query Conservation						.																														.	.	.	.	.	.	.																												.
Alig confidence						.																														.	.	.	.	.	.	.																												.
Template Conservation
Template Sequence		P	S	S	E	A	M	H	V	G	H	L	I	P	F	I	F	T	K	W	L	Q	D	V	F	N	V	P	L	V	I	Q	M	T	D	D	E	K	Y	L	W	K	D	L	T	L	D	Q	A	Y	S	Y	A	V	E	N	A	K	D	I	I	A	C	G	F	D	I	N	K	T	F	I	F	S	D	L	D	Y	M	G	M
Template Known Secondary structure					S			B																		T																S	S																			T	T				T	T	T											T	T
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	N	A	V	I	D	Q	M	L	E	E	G	T	A	Y	K	C	Y	C	S	K	E	R	L	E	A	L	R	E	E	Q	M	A	K	G	E	K	P	R	Y	D	G	R	C	R	H	S	H	E	H	H	A	D	D	E	P	C	V	V	R	F	A	N	P	Q	E	G	S	V	V	F	D	D	Q	I	R	G	P	I	E
Query Conservation
Alig confidence																	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	S	G	F	Y	K	N	V	V	K	I	Q	K	H	V	.	.	.	.	T	F	N	Q	V	K	G	I	F	G	F	T	D	S	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	I	G	K	I	S
Template Known Secondary structure			S	S											T		.	.	.	.													T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.					.	260	.	.	.	.	.	.	.	.	.	270	.	.	.																																									.	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.			.	.	.	.
Predicted Secondary structure																																																																												.	.
Query SS confidence																																																																												.	.
Query Sequence		F	S	N	Q	E	L	D	D	L	I	I	R	R	T	D	G	S	P	T	Y	N	F	C	V	V	V	D	D	W	D	M	E	I	T	H	V	I	R	G	E	D	H	I	N	N	T	P	R	Q	I	N	I	L	K	A	L	K	A	P	V	P	V	Y	A	H	V	S	M	I	N	G	D	D	G	.	.	K	K	L	S
Query Conservation																																																																												.	.
Alig confidence																	.	.	.	.	.	.	.	.																																																				.	.
Template Conservation																	.	.	.	.	.	.	.	.
Template Sequence		F	P	A	I	Q	A	A	P	S	F	S	N	S	F	P	.	.	.	.	.	.	.	.	Q	I	F	R	D	R	T	D	I	Q	C	L	I	P	C	A	I	D	Q	D	P	Y	F	R	M	T	R	D	V	A	P	R	I	G	Y	P	K	P	A	L	L	H	S	T	F	F	P	A	L	Q	G	A	Q	T	K	M	S
Template Known Secondary structure								G	G	G	S	G	G	G			.	.	.	.	.	.	.	.				T	T		S										G	G	G											T	G	G	G	T														B	T	T	B	S	S	S
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.
Template SS confidence
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.									.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
		240	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	R	H	G	A	V	S	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	S	D	P	N	S	S	I
Template Known Secondary structure		S	S	S	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		352	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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