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Job DescriptionP04805
Confidence97.83%DateThu Jan 5 10:58:21 GMT 2012
Rank64Aligned Residues238
% Identity16%Templatec2janD_
PDB info PDB header:ligaseChain: D: PDB Molecule:tyrosyl-trna synthetase; PDBTitle: tyrosyl-trna synthetase from mycobacterium tuberculosis in2 unliganded state
Resolution2.9 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  PTGY. LHVGGARTALYSWLFARNHGGEFVLRIED. . . . . TDLERSTPEAIEAIMDGMNWLSLEWDEGPYYQTKRFDRYNA
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Template Sequence  PTAPSLHAGHLV. PLLTLRRFQRAGHRPIVLAGGATGMIGDTVAEWTERIRGQLERFVDFDDSPMGAIVENNLEWTGSLS
Template Known Secondary structure  TTSSS
BGGG.TT




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SSTT

TTT

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   41........50.. .......60.........70.........80.........90.........100.........110.........
 
   85....90.........100.........110.........120.........130.........140.........150.........160....
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Query Sequence  VIDQMLEEGTAYKCYCSKERLEALREEQMAKGEKPRYDGRCRHSHEHHADDEPCVVRFANPQEGSVVFDDQIRGPIEFSN
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Template Sequence  AIEFLRDIG. . . . . . . . . . . . . . . . . . . . . . . . . . KHFSVNVMLARDTIRRR. . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TG..........................GG

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   133......140. ........150........
 
   165....170......... 180.........190.. .......200.........210.........220.........230......
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Query Sequence  QELDDLIIRRTDGSP. . . . TYNFCVVVDDWDM. . . . EITHVIRGEDHINNTPRQINILKALKAPVPVYAHVSMINGDDGK
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Template Sequence  . . . . . . . . LAGEGISYTEFSYLLLQANDYVELHRRHGCTLQIGGADQWGNIIAGVRLVRQKLGATVHALTVPLVTAADGT
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GGG






B
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   159160.........170.........180.........190.........200.........210.........220.........230
 
   237..240. ........250.........260.........270.........280.........290.........300.........310.....
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Query Sequence  KLSKR. HGAVSVMQYRDDGYLPEALLNYLVRLGWSHGDQEIFTREEMIKYFTLNAVSKSASAFNTDKLLWLNHHYINALP
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Template Sequence  KFGKSTGGGSLWLDP. . QMTSPYAWYQYFVNT. . . . . . . ADADVIRYLRWFTF. . . . . . . . . LSADELAELEQATAQRPQ
Template Known Secondary structure  BTTB
TTS
B
BSST..TTS
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   231........240..... ....250.........260 .........270.... .....280.........290..
 
   316...320.........
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Query Sequence  PEYVATHLQWHIEQ
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Template Sequence  QRAAQRRLASELTV
Template Known Secondary structure  G
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   293......300......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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