Job Description P04805 Confidence 100.00% Date Thu Jan 5 10:58:21 GMT 2012 Rank 10 Aligned Residues 291 % Identity 26% Template c2hz7A_ PDB info PDB header:ligase Chain: A: PDB Molecule:glutaminyl-trna synthetase; PDBTitle: crystal structure of the glutaminyl-trna synthetase from2 deinococcus radiodurans Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	K	T	R	F	A	P	S	P	T	G	Y	L	H	V	G	G	A	R	T	A	L	Y	S	W	L	F	A	R	N	H	G	G	E	F	V	L	R	I	E	D	T	D	L	E	R	S	T	P	E	A	I	E	A	I	M	D	G	M	N	W	L	S	L	E	W	D	E	G	P	Y	Y	Q	T	K	R	F	D	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	V	V	T	R	F	P	P	D	P	S	G	Y	A	H	L	G	H	V	F	A	S	L	L	D	F	N	T	A	R	Q	Y	G	G	Q	F	N	L	R	M	D	D	T	N	P	E	L	A	R	Q	E	Y	V	D	S	I	A	D	D	L	K	W	L	G	L	D	W	G	E	H	F	Y	Y	A	S	D	Y	F	D	R
Template Known Secondary structure		S									S	S	S			B																	T	T												T	T	T																	T				T	T					G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.									.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.		.	.	.	.	150	.	.
Predicted Secondary structure																																														.	.	.	.	.	.	.	.																					.
Query SS confidence																																														.	.	.	.	.	.	.	.																					.
Query Sequence		Y	N	A	V	I	D	Q	M	L	E	E	G	T	A	Y	K	C	Y	C	S	K	E	R	L	E	A	L	R	E	E	Q	M	A	K	G	E	K	P	R	Y	D	G	R	C	.	.	.	.	.	.	.	.	R	H	S	H	E	H	H	A	D	D	E	P	C	V	V	R	F	A	N	P	.	Q	E	G	S	V	V	F
Query Conservation																																														.	.	.	.	.	.	.	.																					.
Alig confidence																																														.	.	.	.	.	.	.	.																					.
Template Conservation
Template Sequence		Y	Y	A	Y	A	E	Q	L	I	R	Q	G	D	A	Y	V	E	S	V	S	P	E	E	L	S	R	L	R	G	N	A	T	T	P	G	T	P	S	P	Y	R	D	R	S	V	E	E	N	L	D	L	L	R	R	M	K	A	G	E	F	A	D	G	E	H	V	L	R	A	K	I	D	L	T	A	P	N	M	K	L
Template Known Secondary structure												T	T	S						S											B	T	T	B						T	T	T	T															T	T		S		T	T	S									T	T		S	S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	D	Q	I	R	G	P	I	E	F	S	N	Q	E	L	D	D	L	I	I	R	R	T	D	G	S	P	T	Y	N	F	C	V	V	V	D	D	W	D	M	E	I	T	H	V	I	R	G	E	D	H	I	N	N	T	P	R	Q	I	N	I	L	K	A	L	K	A	P	V	P	V	Y	A	H	V	S	M	I	N	G
Query Conservation
Alig confidence															.	.	.
Template Conservation															.	.	.
Template Sequence		R	D	P	V	L	Y	R	I	V	N	K	P	H	.	.	.	F	R	T	S	D	E	W	H	I	Y	P	A	Y	D	F	E	H	P	L	Q	D	A	I	E	G	V	T	H	S	M	C	S	L	E	F	V	D	N	R	A	I	Y	D	W	L	M	E	K	L	N	F	D	P	R	P	H	Q	Y	E	F	G	R	R	G
Template Known Secondary structure		S	S											B	.	.	.	T	T	T	B	T	S		S																	T		S						G	G	G	T	T	T											T	T		S	S
Template Predicted Secondary structure															.	.	.
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.				240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
		233	.	.	.	.	.	.	240	.	.																	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	D	G	K	K	L	S	K	R	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	A	V	S	V	M	Q	Y	R	D	D	G	Y	L	P	E	A	L	L	N	Y	L	V	R	L	G	W	S	H	G	D	Q	E	I	F	T	R	E	E	M	I	K	Y	F	T	L	N	A	V	S	K	S	A	S
Query Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	E	Y	T	I	T	S	K	R	K	L	R	E	L	V	Q	A	G	R	V	S	G	W	D	D	P	R	M	P	T	L	R	A	Q	R	R	L	G	V	T	P	E	A	V	R	A	F	A	A	Q	I	G	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	R	T	N	R
Template Known Secondary structure			T	T														T	T	S	S	S	S	T	T		T	T	S	S	B								T													S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S
Template Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.																							.	.	.	360	.
		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	F	N	T	D	K	L	L	W	L	N	H	H	Y	I	N	A	L	P	P	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	V	D	I	A	V	Y	E	N	A	V	R	D	D	L	N	H	R	A	P	R
Template Known Secondary structure																		T	T
Template Predicted Secondary structure
Template SS confidence
		362	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions