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Job DescriptionP04805
Confidence98.56%DateThu Jan 5 10:58:21 GMT 2012
Rank50Aligned Residues179
% Identity19%Templatec2el7A_
PDB info PDB header:ligaseChain: A: PDB Molecule:tryptophanyl-trna synthetase; PDBTitle: crystal structure of tryptophanyl-trna synthetase from thermus2 thermophilus
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1. .......10.........20.........30.. .......40.........50. ........60.........70
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Query Sequence  MK. IKTRFAPSPTGYLHVGGARTALYSWLFARN. HGGEFVLRIEDTDLERSTP. . . . . . . . EAIEAIMDGMNWLSLEWDE
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Template Sequence  MKRVLSGIQPS. . GEIHIGNYLGAIKQWVAIGEKLGRDAFFCIVDYHALTNPLAYDPSTLAQRTFEAALVNIAAGLDPEK
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BTGGG
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   1........10. ........20.........30.........40.........50.........60.........70........
 
   71........80.........90.........100.........110.........120.........130.........140.........
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Query Sequence  . GPYYQTKRFDRYNAVIDQMLEEGTAYKCYCSKERLEALREEQMAKGEKPRYDGRCRHSHEHHADDEPCVVRFANPQEGS
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Template Sequence  VTLFVQSHVPEHTELSWV. . . . . . . . FTTLTPLGDLTRMTQFKDKASK. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  SGGGST........TS
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   7980.........90...... ...100.........110........
 
   150.........160.........170.........180....... ..190.........200.........210.........220
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Query Sequence  VVFDDQIRGPIEFSNQELDDLIIRRTDGSPTYNFCVVV. . . . DDWDMEITHVIRGEDHINNTPRQINILKALKAP. . . . .
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . QETVWSGLLMYPVLQAADILIYKADTVPVGEDQVQHIELTREIARRFNHLFGETF
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   119120.........130.........140.........150.........160.........170...
 
   221..... ...230...... ...240......
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Query Sequence  . VPVYAH. . . VSMINGDDGK. KLSKRHGAVS
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Template Sequence  PEPQALLNPEAPRVPGIDGKAKMSKSLGNTI
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TTS


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TTSSSB

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   174.....180.........190.........200....
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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