Job Description P04805 Confidence 31.80% Date Thu Jan 5 10:58:21 GMT 2012 Rank 93 Aligned Residues 46 % Identity 13% Template c1h3oA_ PDB info PDB header:transcription/tbp-associated factors Chain: A: PDB Molecule:transcription initiation factor tfiid 135 kda PDBTitle: crystal structure of the human taf4-taf122 (tafii135-tafii20) complex Resolution 2.3 Å

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		402	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A	E	N	V	H	H	A	I	Q	A	T	A	D	E	L	E	V	G	M	G	K	V	G	M	P	L	R	V	A	V	T	G	A	G	Q	S	P	A	L	D	V	T	V	H	A	I	G	K	T	R	S	I	E	R	I	N	K	A	L	D	F	I	A	E
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.
Template Sequence		L	Q	A	P	L	Q	R	R	I	L	E	I	G	K	K	H	G	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	E	L	H	P	D	V	V	S	Y	V	S	.	.	.	.	H	A	T	Q	Q	R	L	Q	N	L	V	E	K	I	S	E
Template Known Secondary structure																T	T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	T							.	.	.	.
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.
Template SS confidence
		872	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.																890	.	.	.	.	.	.	.	.	.	900	.					.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions