 |
Job Description | P0ABC3 | Confidence | 6.65% | Date | Thu Jan 5 11:15:09 GMT 2012 |
Rank | 20 | Aligned Residues | 52 |
% Identity | 6% | Template | d2ix0a3 |
SCOP info | OB-fold
| Nucleic acid-binding proteins
| Cold shock DNA-binding domain-like
|
Resolution | 2.44 |
|
  |   |
47 | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | Y | E | P | G | L | H | F | K | I | P | F | I | E | T | V | K | M | L | D | A | R | I | Q | T | M | D | N | Q | A | D | R | F | V | T | K | E | K | K | D | L | I | V | D | S | Y | I | K | W | R | I | S | D |
Query Conservation |   |
|   |   |
|
|
|
|
|   |   |
|   |
|   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |
|   |
|   |   |   |
|   |   |
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |
|
|
|
|
|
|
|
|
|
|
|   |   |
|
|
|   |
|
|
|
|   |
|
|   |
|
|   |
|
|   |
|   |
| . |   |
|   |
|   |   |
|   |   |
|
|
|
|
|
Template Sequence |   |
I | S | R | G | G | M | R | V | R | L | V | D | N | G | A | I | A | F | I | P | A | P | F | L | H | A | V | R | D | E | L | V | C | S | Q | E | N | G | . |
T | V | Q | I | K | G | E | T | V | Y | K | V | T | D |
Template Known Secondary structure |   |
 |  | T | T |  |  |  |  |  |  | T | T | T |
|
|  |  |  |  |  | G | G | G | T |
| S |
| G | G | G |  |  |  |  | T | T | T | T | . |  |  |  |  | T | T |  |  |  |  |  | T | T |
|
Template Predicted Secondary structure |   |
 |  |
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|  | . |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
571 | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 | . | . | . | . | . | . | . | . | |
. | 610 | . | . | . | . | . | . | . | . | . | 620 | . | . |
  |
Send structure to FirstGlance for more viewing options
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|