Job Description P0ABC3 Confidence 99.86% Date Thu Jan 5 11:15:09 GMT 2012 Rank 1 Aligned Residues 157 % Identity 25% Template c3bk6C_ PDB info PDB header:membrane protein Chain: C: PDB Molecule:ph stomatin; PDBTitle: crystal structure of a core domain of stomatin from2 pyrococcus horikoshii Resolution 3.20 Å

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		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	I	E	T	V	K	M	L	D	A	R	I	Q	T	M	D	N	Q	A	D	R	F	V	T	K	E	K	K	D	L	I	V	D	S	Y	I	K	W	R	I	S	D	F	S	R	Y	Y	L	A	T	G	G	G	D	I	S	Q	A	E	V	L	L	K	R	K	F	S	D	R	L	R	S	E	I	G	R	L	D	V	K
Query Conservation
Alig confidence																																																		.	.	.	.	.
Template Conservation																																																		.	.	.	.	.
Template Sequence		I	F	E	K	A	V	I	V	D	L	R	T	Q	V	L	D	V	P	V	Q	E	T	I	T	K	D	N	V	P	V	R	V	N	A	V	V	Y	F	R	V	V	D	P	V	K	A	V	T	.	.	.	.	.	Q	V	K	N	Y	I	M	A	T	S	Q	I	S	Q	T	T	L	R	S	V	I	G	Q	A	H	L	D
Template Known Secondary structure											S	S														T	T																							.	.	.	.	.	S	S	S																					S
Template Predicted Secondary structure																																																		.	.	.	.	.
Template SS confidence
		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.						.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	I	V	T	D	S	R	G	R	L	T	L	E	V	R	D	A	L	N	S	G	S	A	G	T	E	D	E	V	T	T	P	A	A	D	N	A	I	A	E	A	A	E	R	V	T	A	E	T	K	G	K	V	P	V	I	N	P	N	S	M	A	A	L	G	I	E	V	V	D	V	R	I	K	Q	I	N	L	P	T
Query Conservation
Alig confidence					.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation					.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	L	L	.	S	E	R	D	K	L	N	M	Q	L	Q	R	I	I	D	E	A	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	P	W	G	I	K	V	T	A	V	E	I	K	D	V	E	L	P	A
Template Known Secondary structure					.																		T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G	T															T
Template Predicted Secondary structure					.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		131	.	.		.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.																																								.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	V	S	E	A	I	Y	N	R	M	R	A	E	R	E	A	V	A	R	R	H	R	S	Q	G	Q	E	E	A	E	K	L	R	A	T	A	D	Y	E	V	T	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	M	Q	K	A	M	A	R	Q	A	E	A	E	R	E	R	R	A	R	I	T	L	A	E	A	E	R	Q	A	A	E	K	L	R	E	A	A	E	I	I	S	E
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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