Job Description P32136 Confidence 54.26% Date Thu Jan 5 11:49:21 GMT 2012 Rank 7 Aligned Residues 220 % Identity 10% Template c3hd6A_ PDB info PDB header:membrane protein, transport protein Chain: A: PDB Molecule:ammonium transporter rh type c; PDBTitle: crystal structure of the human rhesus glycoprotein rhcg Resolution 2.10 Å

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		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	H	K	A	S	I	L	K	S	F	C	A	I	F	R	N	P	P	L	L	V	L	C	I	A	N	L	C	T	L	A	A	F	N	I	K	L	A	I	Q	V	Y	Y	T	Q	Y	V	L	N	D	I	N	L	L	S	W	M	G	F	F	S	M	G	C	I	L	I	G	V	L	L	V	P	L	T	V	K	C	F	G
Query Conservation
Alig confidence																																													.	.	.	.	.	.	.
Template Conservation																																													.	.	.	.	.	.	.
Template Sequence		Y	R	R	N	L	E	Q	S	K	E	R	Q	N	S	V	Y	Q	S	D	L	F	A	M	I	G	T	L	F	L	W	M	Y	W	P	S	F	N	S	A	I	S	Y	H	.	.	.	.	.	.	.	G	D	S	Q	H	R	A	A	I	N	T	Y	C	S	L	A	A	C	V	L	T	S	V	A	I	S	S	A	L	H
Template Known Secondary structure				T	T	G	G	G	G	T	T	T	S	S																								T	T	T	T		S	S	.	.	.	.	.	.	.																													T	S
Template Predicted Secondary structure																																													.	.	.	.	.	.	.
Template SS confidence
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.								.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320		.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence		K	K	Q	V	Y	L	A	G	M	V	L	W	A	V	G	D	I	L	N	Y	F	.	W	G	S	N	S	F	T	F	V	M	F	S	C	V	A	F	F	G	T	A	F	V	N	S	L	N	W	A	L	V	P	D	T	V	D	Y	G	E	W	K	T	G	I	R	A	E	G	S	V	Y	T	G	Y	T	F	F	R	K
Query Conservation																							.
Alig confidence																							.																																			.	.	.
Template Conservation																																																										.	.	.
Template Sequence		K	K	G	K	L	D	M	V	H	I	Q	N	A	T	L	A	G	G	V	A	V	G	T	A	A	E	M	M	L	M	P	Y	G	A	L	I	I	G	F	V	C	G	I	I	S	T	L	G	F	V	Y	L	T	P	F	L	.	.	.	E	S	R	L	H	I	Q	D	T	C	G	I	N	N	L	H	G	I	P	G	I
Template Known Secondary structure		T	T											G	G	G						T	T	T	T	T	T	T		S																												.	.	.									T	T						T
Template Predicted Secondary structure																																																										.	.	.
Template SS confidence
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.				.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.
		379	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	S	A	A	L	A	G	F	L	P	G	I	M	L	T	Q	I	G	Y	V	P	N	I	A	Q	S	D	A	T	L	Q	G	L	R	Q	L	I	F	I	W	P	C	A	L	A	I	I	A	A	L	T	M	G	F	F	Y	T	L	N	E	K	R	F	A	L	I	I	E	E	I	N	Q	R	K	N	K	E	M	A	T
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	G	G	I	V	G	A	V	T	A	.	.	.	.	.	.	.	.	.	.	.	A	S	D	W	T	A	R	T	Q	G	K	F	Q	I	Y	G	L	L	V	T	L	A	M	A	L	M	G	G	I	I	V	G	L	I	L	R	L	P	F	W	G	Q	P	S	D	E	N	C	F	E	D	A	V	Y	W	E	M	P	E
Template Known Secondary structure												.	.	.	.	.	.	.	.	.	.	.																																				T	S	T	T	S					T	T	S	T	T		G	G	G	T	S				T
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		350	.	.	.	.	.	.	.	.	.												360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.
		459	460
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	N
Template Known Secondary structure		T	T
Template Predicted Secondary structure
Template SS confidence
		441	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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