Job Description P32136 Confidence 10.49% Date Thu Jan 5 11:49:21 GMT 2012 Rank 11 Aligned Residues 130 % Identity 9% Template c2w8aC_ PDB info PDB header:membrane protein Chain: C: PDB Molecule:glycine betaine transporter betp; PDBTitle: crystal structure of the sodium-coupled glycine betaine2 symporter betp from corynebacterium glutamicum with bound3 substrate Resolution 3.35 Å

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		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	D	I	L	N	Y	F	W	G	S	N	S	F	T	F	V	M	F	S	C	V	A	F	F	G	T	A	F	V	N	S	L	N	W	A	L	V	P	D	T	V	D	Y	G	E	W	K	T	G	I	R	A	E	G	S	V	Y	T	G	Y	T	F	F	R	K	I	S	A	A	L	A	G	F	L	P	G	I	M	L
Query Conservation
Alig confidence																																																											.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																											.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	L	F	G	L	L	H	A	L	P	G	G	Q	I	X	G	I	I	A	X	I	L	L	G	T	F	F	I	T	S	A	D	S	A	S	T	V	X	G	T	X	S	Q	H	G	Q	L	E	A	N	K	W	V	T	A	A	W	.	.	.	.	.	.	.	.	.	.	.	G	V	A	T	A	A	I	G	L	T	L	L
Template Known Secondary structure									T	S	T	T																															T	T	T	T		S	S										.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		439	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.												.	.	.	.	500	.	.	.	.	.	.	.
		393	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	Q	I	G	Y	V	P	N	I	A	Q	S	D	A	T	L	Q	G	L	R	Q	L	I	F	I	W	P	C	A	L	A	I	I	A	A	L	T	M	G	F	F	Y	T	L	N	E	K	R	F	A	L	I	I	E	E	I	N	Q	R	K	N	K	E	M	A	T	E	E	K
Query Conservation
Alig confidence						.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.
Template Sequence		L	S	G	G	.	.	.	.	.	.	.	.	D	N	A	L	S	N	L	Q	N	V	T	I	V	A	A	T	P	F	L	F	V	V	I	G	L	X	F	A	L	V	K	D	L	S	N	D	V	I	Y	L	E	Y	R	E	Q	Q	R	F	N	A	R	L	A	R	E	R	R
Template Known Secondary structure					G	.	.	.	.	.	.	.	.	G	G																																	T
Template Predicted Secondary structure						.	.	.	.	.	.	.	.
Template SS confidence
		508	.	510	.									.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions