Job Description P60664 Confidence 97.29% Date Thu Jan 5 12:07:01 GMT 2012 Rank 179 Aligned Residues 180 % Identity 16% Template d1v5xa_ SCOP info TIM beta/alpha-barrel Ribulose-phoshate binding barrel Tryptophan biosynthesis enzymes Resolution 2.00

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.				.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																												.	.	.
Query SS confidence																																												.	.	.
Query Sequence		V	P	L	A	K	R	Y	A	E	E	G	A	D	E	L	V	F	Y	D	I	T	A	S	S	D	G	R	V	V	D	K	S	W	V	S	R	V	A	E	V	I	D	.	.	.	I	P	F	C	V	A	G	G	I	K	S	L	E	D	A	A	K	I	L	S	F	G	A	D	K	I	S	I	N	S	P	A	L	A	D
Query Conservation																																												.	.	.
Alig confidence																										.	.																	.	.	.																																.	.
Template Conservation																										.	.																																																			.	.
Template Sequence		L	E	D	A	L	L	A	E	A	L	G	A	F	A	L	G	F	V	L	A	P	G	S	R	.	.	R	R	I	A	P	E	A	A	R	A	I	G	E	A	L	G	P	F	V	V	R	V	G	V	F	R	D	Q	P	P	E	E	V	L	R	L	M	E	E	A	R	L	Q	V	A	Q	L	H	G	E	.	.	E	P
Template Known Secondary structure												T		S								T	T		T	.	.	T	B													S		S	S	S							S	S													T	T		S						S		.	.
Template Predicted Secondary structure																										.	.																																																			.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.			.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.			.	.
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	T	L	I	T	R	L	A	D	R	F	G	V	Q	C	I	V	V	G	I	D	T	W	Y	D	A	E	T	G	K	Y	H	V	N	Q	Y	T	G	D	E	S	R	T	R	V	T	Q	W	E	T	L	D	W	V	Q	E	V	Q	K	R	G	A	G	E	I	V	L	N	M	M	N	Q	D	G	V	R	N	G	Y	D
Query Conservation
Alig confidence														.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Template Conservation														.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Template Sequence		P	E	W	A	E	A	V	G	R	F	Y	P	.	.	.	V	I	K	A	F	P	L	E	G	P	A	R	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	W	A	D	Y	P	A	Q	A	L	L	L	.	D	G	K	R	P	G	S	G	E	A	Y	P
Template Known Secondary structure									T	T	T	S		.	.	.								S	S	S			G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G	G	S	S		S					.			S	S	T	T	S
Template Predicted Secondary structure														.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.				.	100	.	.	.	.	.	.	.	.	.	110	.																												.	.	.	.	.	.	.	.	120	.	.	.		.	.	.	.	.	.	130	.	.	.	.	.
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.			.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure																																															.	.
Query SS confidence																																															.	.
Query Sequence		L	E	Q	L	K	K	V	R	E	V	C	H	V	P	L	I	A	S	G	G	A	G	T	M	E	H	F	L	E	A	F	R	D	A	D	V	D	G	A	L	A	A	S	V	F	.	.	H	K	Q	I	I	N	I	G	E	L	K	A	Y	L	A	T
Query Conservation																																															.	.
Alig confidence											.												.										.														.	.
Template Conservation											.												.										.
Template Sequence		R	A	W	A	K	P	L	L	A	.	T	G	R	R	V	I	L	A	G	G	I	.	A	P	E	N	L	E	E	V	L	.	A	L	R	P	Y	A	L	D	L	A	S	G	V	E	E	A	P	G	V	K	S	A	E	K	L	R	A	L	F	A	R
Template Known Secondary structure		G	G	G	G						.	T	T	S						S	S		.		S	T	T						.					S					S	G	G	G				T	T
Template Predicted Secondary structure											.												.										.
Template SS confidence
		136	.	.	.	140	.	.	.	.		.	.	.	.	.	150	.	.	.	.	.		.	.	.	.	160	.	.	.	.		.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions